Evidence map›Paper›PMID 42100640›Full record

ArticleRSC chemical biology2026

RNA-binding landscape of amiloride: large-scale profiling and structural basis of U-U mismatch recognition.

Kosuke Tsuzuki, Kazumitsu Onizuka, Momo Okada, Ryosuke Nagasawa, Emi Miyashita, Kaoru R Komatsu, Hirohide Saito, Jiro Kondo, Fumi Nagatsugi

Abstract read
In one paragraph

Article in RSC chemical biology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0cells of the map it votes in
0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Kosuke TsuzukiInstitute of Multidisciplinary Research for Advanced Materials, Tohoku University Miyagi 980-8577 Japan onizuka@tohoku.ac.jp nagatugi@tohoku.ac.jp.ORCID https://orcid.org/0009-0001-9888-8778
Kazumitsu OnizukaInstitute of Multidisciplinary Research for Advanced Materials, Tohoku University Miyagi 980-8577 Japan onizuka@tohoku.ac.jp nagatugi@tohoku.ac.jp.ORCID https://orcid.org/0000-0001-9713-4619
Momo OkadaDepartment of Materials and Life Sciences, Faculty of Science and Technology, Sophia University Tokyo 102-8554 Japan j.kondo@sophia.ac.jp.
Ryosuke NagasawaInstitute of Multidisciplinary Research for Advanced Materials, Tohoku University Miyagi 980-8577 Japan onizuka@tohoku.ac.jp nagatugi@tohoku.ac.jp.ORCID https://orcid.org/0009-0002-0474-3218
Emi MiyashitaCenter for iPS Cell Research and Application (CiRA), Kyoto University Kyoto 606-8507 Japan.
Kaoru R KomatsuCenter for iPS Cell Research and Application (CiRA), Kyoto University Kyoto 606-8507 Japan.ORCID https://orcid.org/0000-0002-4505-0840
Hirohide SaitoCenter for iPS Cell Research and Application (CiRA), Kyoto University Kyoto 606-8507 Japan.ORCID https://orcid.org/0000-0002-8570-5784
Jiro KondoDepartment of Materials and Life Sciences, Faculty of Science and Technology, Sophia University Tokyo 102-8554 Japan j.kondo@sophia.ac.jp.ORCID https://orcid.org/0000-0002-5682-3685
Fumi NagatsugiInstitute of Multidisciplinary Research for Advanced Materials, Tohoku University Miyagi 980-8577 Japan onizuka@tohoku.ac.jp nagatugi@tohoku.ac.jp.ORCID https://orcid.org/0000-0002-5526-6020

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Amiloride possesses a characteristic chemical scaffold capable of recognizing uracil (U) through three complementary hydrogen bonds; however, its binding selectivity toward naturally occurring RNA structural motifs has remained uncharacterized. In this study, we present a large-scale analysis of amiloride's RNA binding properties and structural characterization of the amiloride-RNA complex. Using folded RNA element profiling with structure library (FOREST), we evaluated the RNA-binding selectivity of amiloride across 3000 structured RNA motifs and uncovered pronounced binding preferences for G-quadruplexes and, notably, for a specific internal loop motif containing a U-U mismatch (

Identifiers

PMID42100640
PMCPMC13147285

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.