Evidence map›Paper›PMID 42100387›Full record

ArticleFrontiers in oncology2026

NELFA-mediated pausing restrains YAP transcription and context-dependent outcomes in breast cancer.

Bhavesh S Vasave, Aadya A Atreya, Rishabh D Kulkarni, Sanket S Nagarkar, Khushi R Salvi, C B Koppiker, L S Shashidhara, Madhura D Kulkarni

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Article in Frontiers in oncology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

8 authors.

Bhavesh S VasaveIndian Institute of Science Education and Research (IISER), Pune, India.
Aadya A AtreyaPrashanti Cancer Care Mission (PCCM), Pune, India.
Rishabh D KulkarniIndian Institute of Science Education and Research (IISER), Pune, India.
Sanket S NagarkarIndian Institute of Science Education and Research (IISER), Pune, India.
Khushi R SalviPrashanti Cancer Care Mission (PCCM), Pune, India.
C B KoppikerPrashanti Cancer Care Mission (PCCM), Pune, India.
L S ShashidharaIndian Institute of Science Education and Research (IISER), Pune, India.
Madhura D KulkarniPrashanti Cancer Care Mission (PCCM), Pune, India.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Introduction: The Hippo pathway effector YAP signaling is frequently dysregulated in cancer, promoting transcriptional programs linked to tumor progression. However, how general transcriptional control mechanisms intersect with YAP activity remains unclear. Methods: We investigated the role of NELFA, a component of promoter-proximal pausing (PPP), using genetic perturbation in HEK293T cells and MDA-MB-231. Transcriptomic profiling and analysis of three independent breast cancer cohorts were performed to assess clinical relevance. Results: NELFA depletion resulted in selective amplification of YAP-dependent transcription in HEK293T and MDA-MB-231. Gene expression analyses showed enrichment of YAP targets alongside epithelial-mesenchymal transition and TGF-β signaling-associated programs. Clinically, low NELFA expression correlated with poorer disease-free survival in YAP-high tumors, specifically in triple-negative breast cancer. Discussion: These findings identify PPP as a conserved regulatory layer modulating YAP-driven oncogenic transcription. Loss of NELFA may enhance oncogenic transcriptional programs specifically in TNBC, highlighting its potential relevance as a context-dependent biomarker in aggressive breast cancer subtypes.

Indexed as

breast cancerNELFApromoter proximal pausing (PPP) complexTNBCyes-associatedprotein-1 (YAP)

Identifiers

PMID42100387
PMCPMC13143776

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