Conspecific Scaffold-Level Genome Assembly Outperforms Heterospecific Chromosome-Level Assemblies for Assessing Genetic Indicators in a Threatened Marine Fish.

Mannda Ndou, Warren Mason Potts, Tuan Anh Duong, Peter Rodja Teske, Amber-Robyn Childs, Romina Henriques

Abstract read

In one paragraph

Article in Evolutionary applications, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it

0cells of the map it votes in

0citing papers in PubMed

–field-weighted citation impact

1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Mannda NdouDepartment of Biochemistry, Genetics and Microbiology University of Pretoria Pretoria South Africa.ORCID https://orcid.org/0000-0002-0889-178X

Warren Mason PottsDepartment of Ichthyology and Fisheries Sciences Rhodes University Makhanda South Africa.ORCID https://orcid.org/0000-0002-6707-0383

Tuan Anh DuongDepartment of Biochemistry, Genetics and Microbiology University of Pretoria Pretoria South Africa.

Peter Rodja TeskeCentre for Ecological Genomics and Wildlife Conservation, Department of Zoology University of Johannesburg Auckland Park South Africa.ORCID https://orcid.org/0000-0002-2838-7804

Amber-Robyn ChildsDepartment of Ichthyology and Fisheries Sciences Rhodes University Makhanda South Africa.ORCID https://orcid.org/0000-0003-4717-2646

Romina HenriquesDepartment of Biochemistry, Genetics and Microbiology University of Pretoria Pretoria South Africa.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Understanding the genomic architecture of species of conservation concern is essential for fostering effective conservation initiatives. Current biodiversity assessment approaches increasingly incorporate genetic metrics to evaluate the status of species and populations of conservation interest. However, due to the limited availability of conspecific genomes for most non-model species, previous studies have often depended on heterospecific genomes. This approach has been shown to significantly impact the precision of genetic metrics, resulting in inaccurate measurements and insights. However, it is currently unknown what the impact of using non-species-specific genomes is for the determination of genetic indicators in vulnerable marine fishes, such as red roman (

Indexed as

genetic indicator metricsnon‐model speciessingle nucleotide polymorphism (SNPs)whole genome sequencing

Identifiers

PMID42099871

DOI10.1111/eva.70247

PMCPMC13144753

What OpenQuestion holds

Textmetadata

LicenceCC BY

Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.