Evidence map›Paper›PMID 42094510›Full record

ArticlebioRxiv : the preprint server for biology2026

A Head and Neck Cancer Patient-Specific Microphysiological System for Predicting Response to Chemoradiation.

Adeel Ahmed, Nathan Hendrikse, Rene Welch Schwartz, Yuanshan Li, Marcos Lares, Cassidy K Felix, Adam R Burr, Irene M Ong, Paul M Harari, David J Beebe and 1 more

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Adeel AhmedCarbone Cancer Center, University of Wisconsin - Madison, Madison, WI, USA.ORCID 0000-0003-4511-8208
Nathan HendrikseCarbone Cancer Center, University of Wisconsin - Madison, Madison, WI, USA.
Rene Welch SchwartzDepartment of Biostatistics and Medical Informatics, School of Medicine and Public Health, University of Wisconsin-Madison, Madison, WI, USA.ORCID 0000-0001-9861-530X
Yuanshan LiCancer Biology Graduate Program, McArdle Laboratory for Cancer Research, School of Medicine and Public Health, University of Wisconsin, Madison, WI 53705, USA.
Marcos LaresCarbone Cancer Center, University of Wisconsin - Madison, Madison, WI, USA.ORCID 0000-0001-7223-7806
Cassidy K FelixCarbone Cancer Center, University of Wisconsin - Madison, Madison, WI, USA.
Adam R BurrDepartment of Human Oncology, University of Wisconsin School of Medicine and Public Health, Carbone Cancer Center, Madison, Wisconsin, USA.ORCID 0000-0002-1379-1257
Irene M OngCarbone Cancer Center, University of Wisconsin - Madison, Madison, WI, USA.ORCID 0000-0002-9353-6941
Paul M HarariDepartment of Pathology and Laboratory Medicine, University of Wisconsin-Madison, Madison, 53705, USA.ORCID 0000-0002-6207-5505
David J BeebeCarbone Cancer Center, University of Wisconsin - Madison, Madison, WI, USA.ORCID 0000-0002-0415-9006
Sheena C KerrCarbone Cancer Center, University of Wisconsin - Madison, Madison, WI, USA.ORCID 0000-0002-4404-3382

Funding

UW COMPREHENSIVE CANCER CENTER SUPPORTP30CA014520 · NCI · UNIVERSITY OF WISCONSIN-MADISON · PI Justine Yang Bruce · 1985 to 2026
$142.6M
Project 3: Modulation of the head and neck tumor immune microenvironment by targeting the TAM family of receptorsP50CA278595 · NCI · UNIVERSITY OF WISCONSIN-MADISON · PI David J Beebe · 2022 to 2026
$12.5M
NCI NIH HHS P30 CA014520NCI NIH HHS P50 CA278595
6 · The paper itself

Abstract

Head and neck cancer (HNC) is the 6th most common malignancy worldwide. 60% of patients present with advanced disease and approximately 50% of patients recur following primary treatment. Chemoradiation remains a standard of care for most patients. However, clinicians lack functional tools to predict which patients will respond to chemoradiation prior to treatment and current models, including organoids and animal model systems, fail to capture either full complexity or patient-to-patient heterogeneity of the individual HNC tumor and microenvironment (TME). Here, we have developed, characterized, and tested a patient-specific microphysiological system (MPS) that reconstructs the HNC TME in a vascularized 3D environment. This MPS was constructed from malignant cells, fibroblasts, and immune cells from a patient's surgically resected tumor, seeded within a 3D hydrogel with molded endothelial lumens. Single-cell RNA sequencing confirmed that the MPS preserved 12 transcriptionally distinct cell populations found in matched native tissue. The platform recapitulated tumor hypoxia, with a 12-fold increase in hypoxic marker expression that altered radiation response, consistent with clinical HNC biology. Compartment-resolved imaging revealed distinct treatment dynamics in tumor, stromal, and vascular regions, and individual patients exhibited divergent responses to chemoradiation in spheroid morphology, cell viability, and migration. We found the slope of spheroid area change with treatment tracked with tumor recurrence, suggesting this metric could serve as a functional predictor of therapeutic response.

Identifiers

PMID42094510
PMCPMC13142385

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.