Evidence map›Paper›PMID 42094432›Full record

ArticlebioRxiv : the preprint server for biology2026

Designed Minibinders Rewire Receptor Signaling to Enable Functional Human Myogenic Reprogramming.

Riya Keshri, Zachary Foreman, Phillip Barrett, Alexander Robinson, Gabriela Reyes, Ashish Phal, Aditya KrishnaKumar, Ethan Narog, Melodie Chiu, Shruti Jain and 11 more

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors.

Riya KeshriDepartment of Biochemistry, University of Washington, Seattle, United States.ORCID 0000-0001-7708-6402
Zachary ForemanInstitute for Stem Cell and Regenerative Medicine, University of Washington,School of Medicine, Seattle, United States.
Phillip BarrettInstitute for Stem Cell and Regenerative Medicine, University of Washington,School of Medicine, Seattle, United States.
Alexander RobinsonDepartment of Biochemistry, University of Washington, Seattle, United States.
Gabriela ReyesDepartment of Biochemistry, University of Washington, Seattle, United States.
Ashish PhalDepartment of Biochemistry, University of Washington, Seattle, United States.
Aditya KrishnaKumarDepartment of Biochemistry, University of Washington, Seattle, United States.
Ethan NarogDepartment of Biochemistry, University of Washington, Seattle, United States.
Melodie ChiuInstitute for Stem Cell and Regenerative Medicine, University of Washington,School of Medicine, Seattle, United States.
Shruti JainDepartment of Biochemistry, University of Washington, Seattle, United States.
Xinru WangDepartment of Biochemistry, University of Washington, Seattle, United States.
David LeeInstitute for Protein Design, University of Washington, School of Medicine, Seattle, United States.
Marc ExpositDepartment of Biochemistry, University of Washington, Seattle, United States.
Mohamad AdediDepartment of Biochemistry, University of Washington, Seattle, United States.
Alec St SmithInstitute for Stem Cell and Regenerative Medicine, University of Washington,School of Medicine, Seattle, United States.
Sanjay SrivatsanDepartment of Genomics, University of Washington, School of Medicine, Seattle, United States.
Jay ShendureDepartment of Genomics, University of Washington, School of Medicine, Seattle, United States.
Julie MathieuDepartment of Biochemistry, University of Washington, Seattle, United States.
David L MackInstitute for Stem Cell and Regenerative Medicine, University of Washington,School of Medicine, Seattle, United States.ORCID 0000-0003-1340-7056
David BakerDepartment of Biochemistry, University of Washington, Seattle, United States.
Hannele Ruohola-BakerDepartment of Biochemistry, University of Washington, Seattle, United States.ORCID 0000-0002-5588-4531

Funding

Progenitor Cell Biology Consortium Administrative Coordinating CenterU01HL099997 · NHLBI · UNIVERSITY OF MARYLAND BALTIMORE · PI TERRIN, MICHAEL L · 2009 to 2015
$29.9M
Self Renewal and Differentiation of Human Embryonic Stem CellsP01GM081619 · NIGMS · UNIVERSITY OF WASHINGTON · PI REH, THOMAS A · 2007 to 2017
$20.6M
Controlling Hematopoietic Lineage Commitment from ESC to PlateletsU01HL099993 · NHLBI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI TOROK-STORB, BEVERLY J. · 2009 to 2015
$8.3M
Genetic underpinnings of craniofacial disorders explored with spatial sequencingR01DE033016 · NIDCR · UNIVERSITY OF WASHINGTON · PI Robert Aaron Cornell, Julie Mathieu · 2023 to 2026
$2.9M
MicroRNA Function in Human Embryonic Stem CellsR01GM083867 · NIGMS · UNIVERSITY OF WASHINGTON · PI RUOHOLA-BAKER, HANNELE · 2008 to 2011
$1.5M
Acquisition of Embryonic Stem Cell Metabolic Signature - Minority SupplementR01GM097372 · NIGMS · UNIVERSITY OF WASHINGTON · PI RUOHOLA-BAKER, HANNELE · 2011 to 2014
$1.3M
AI-guided miniproteins driving the production and functional endurance of pancreatic islet tissue from pluripotent stem cells.RC2DK140839 · NIDDK · UNIVERSITY OF WASHINGTON · PI CIRULLI, VINCENZINO · 2024 to 2024
$876k
NHLBI NIH HHS U01 HL099993NHLBI NIH HHS U01 HL099997NIDCR NIH HHS R01 DE033016NIDDK NIH HHS RC2 DK140839NIGMS NIH HHS P01 GM081619NIGMS NIH HHS R01 GM083867NIGMS NIH HHS R01 GM097372
6 · The paper itself

Abstract

Sarcopenia, loss of muscle mass is a considerable health burden that demands immediate societal attention. Direct myogenic somatic cell reprogramming, a potential muscle regeneration method is constrained by an inability to control the signaling logic that governs cell fate. Here, we show that this barrier can be overcome using AI-designed receptor modulators. Screening de novo minibinders, we identify a synthetic protein cocktail, C6-DPC, that drives efficient human fibroblast-to-muscle transdifferentiation with robust structural and metabolic maturation. C6-DPC reprograms extracellular signaling by activating pro-myogenic FGFR1/2c pathways while suppressing anti-myogenic inputs through ALK1 and TGFBR2; targeted depletion of ALK1 is sufficient to lower the reprogramming barrier. Inflammatory signaling via gp130 emerges as a dominant checkpoint, and its inhibition further enhances conversion. Engineered tissues generate high twitch and tetanic forces in both wild-type and dystrophin-deficient human cells. These findings demonstrate that programmable synthetic ligands can rewrite receptor-level signaling to direct cell fate and enable functional tissue regeneration.

Identifiers

PMID42094432
PMCPMC13142334

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.