Evidence map›Paper›PMID 42093056›Full record

ArticleMicrobiome2026

Soil pH as an external filter shaping stink bug-Burkholderia gut symbiosis.

Hideomi Itoh, Hiroyuki Shimoji, Daisuke Nakane, Seonghan Jang, Yoshitomo Kikuchi

Abstract read
In one paragraph

Article in Microbiome, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Hideomi ItohBiomanufacturing Process Research Center, National Institute of Advanced Industrial Science and Technology (AIST), Hokkaido Center, Sapporo, Hokkaido, 062-8517, Japan. hideomi-itou@aist.go.jp.
Hiroyuki ShimojiFaculty of Agriculture, University of the Ryukyus, Nishihara, Okinawa, 903-0213, Japan.
Daisuke NakaneGraduate School of Informatics and Engineering, The University of Electro-Communications, Chofu, Tokyo, 182-8585, Japan.
Seonghan JangBiomanufacturing Process Research Center, National Institute of Advanced Industrial Science and Technology (AIST), Hokkaido Center, Sapporo, Hokkaido, 062-8517, Japan.
Yoshitomo KikuchiBiomanufacturing Process Research Center, National Institute of Advanced Industrial Science and Technology (AIST), Hokkaido Center, Sapporo, Hokkaido, 062-8517, Japan. y-kikuchi@aist.go.jp.

Funding

Japan Society for the Promotion of Science 19K15724Japan Society for the Promotion of Science 22H05065
6 · The paper itself

Abstract

backgroundMany animals and plants establish intimate symbiotic relationships with specific microorganisms acquired from the environment. Given the immense diversity of environmental microbiomes, selecting appropriate partners from such a vast microbial pool poses a critical challenge for host organisms. To meet this challenge, hosts have evolved sophisticated internal partner-choice mechanisms that ensure stable associations with beneficial microbes. However, because these symbionts primarily inhabit external environments, environmental conditions themselves are also expected to influence the establishment of symbiosis. Despite this expectation, the mechanistic role of external environmental filters in shaping the intended symbiosis remains largely unexplored. Focusing on stink bugs, which acquire their symbiotic bacteria from soil each generation, we investigated how soil properties influence the establishment of gut symbiosis in terrestrial insects.

resultsMicrobiome analyses confirmed that Burkholderia sensu lato overwhelmingly dominates a specific gut organ in six stink bug species from the superfamilies Coreoidea and Lygaeoidea, including serious agricultural pests (relative abundance ranging from 74.5 to 100%). Rearing experiments with isolated Burkholderia revealed that insects were strictly dependent on this symbiont; failure to acquire it from soil severely reduced host growth and reproduction, indicating that the availability of symbionts from soil can represent an ecological constraint. Field surveys identified patches of exceptionally high stink bug density in weedy fields with soil pH < 7.0, whereas such aggregations were absent in fields with pH ≥ 7.0. Laboratory experiments with collected field soils showed that the abundance of Burkholderia in soils was negatively correlated with soil pH, and stink bugs readily acquired their symbionts from soils with pH < 7.0 but rarely from soils with pH ≥ 7.0. Experimental manipulations of soil pH followed by rearing experiments confirmed that increasing soil pH to 7-8 markedly suppressed symbiont acquisition by the host, likely by impairing symbiont growth and motility.

conclusionsWe demonstrate that, beyond host-intrinsic mechanisms, a soil chemical property can act as an externally filter that constrains symbiont acquisition prior to colonization inside the host in a stink bug-Burkholderia symbiosis. This finding highlights how local environmental conditions can shape the assembly of environmentally acquired insect-microbe symbioses. Video Abstract.

Indexed as

BurkholderiaGastrointestinal MicrobiomeHeteropteraSoilSoil MicrobiologySymbiosisAnimalsHydrogen-Ion ConcentrationSoilGut microbiomeHost fitnessSoil microbiomeSoil pHStink bugSymbiosis

Identifiers

PMID42093056
PMCPMC13151246

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.