Evidence map›Paper›PMID 42091599›Full record

ArticleNature communications2026

Siamese foundation models for crystal structure prediction.

Liming Wu, Wenbing Huang, Rui Jiao, Jianxing Huang, Liwei Liu, Yipeng Zhou, Hao Sun, Yang Liu, Fuchun Sun, Yuxiang Ren and 1 more

Abstract read
In one paragraph

Article in Nature communications, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Liming Wu *Gaoling School of Artificial Intelligence, Renmin University of China, Beijing, China.
Wenbing Huang *Gaoling School of Artificial Intelligence, Renmin University of China, Beijing, China. hwenbing@ruc.edu.cn.ORCID http://orcid.org/0000-0002-2566-4159
Rui JiaoDepartment of Computer Science and Technology, Tsinghua University, Beijing, China.ORCID http://orcid.org/0009-0005-1718-4920
Jianxing HuangAdvanced Computing and Storage Lab, Huawei Technologies, Shanghai, China.
Liwei LiuAdvanced Computing and Storage Lab, Huawei Technologies, Shanghai, China.
Yipeng ZhouAdvanced Computing and Storage Lab, Huawei Technologies, Shanghai, China.
Hao SunGaoling School of Artificial Intelligence, Renmin University of China, Beijing, China.ORCID http://orcid.org/0000-0002-5145-3259
Yang LiuDepartment of Computer Science and Technology, Tsinghua University, Beijing, China.ORCID http://orcid.org/0000-0002-3087-242X
Fuchun SunDepartment of Computer Science and Technology, Tsinghua University, Beijing, China.
Yuxiang RenSchool of Intelligence Science and Technology, Nanjing University, Suzhou, China. renyuxiang@nju.edu.cn.
Ji-Rong WenGaoling School of Artificial Intelligence, Renmin University of China, Beijing, China. jrwen@ruc.edu.cn.ORCID http://orcid.org/0000-0002-9777-9676

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Predicting crystal structures from chemical compositions is a fundamental challenge in materials discovery, complicated by complex 3D geometries that distinguish it from fields like protein folding. Here, we present Diffusion-based crystAl Omni (DAO), a pretrain-finetune framework for crystal structure prediction integrating two Siamese foundation models: a structure generator and an energy predictor. The generator is pretrained via a two-stage pipeline on a vast dataset of stable and unstable structures, leveraging the predictor to relax unstable configurations and guide the generative sampling. Across two well-known benchmarks, pretraining significantly enhances performance across multiple backbone architectures. Ablation studies confirm that the synergy between the generator and predictor mutually benefits both components. We further validate DAO on three real-world superconductors (Cr

Identifiers

PMID42091599
PMCPMC13358074

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.