Evidence map›Paper›PMID 42088367›Full record

ArticleiScience2026

Intramolecular seal against proton backflow in bacteriorhodopsin.

Zhong Ren

Abstract read
In one paragraph

Article in iScience, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

1 author.

Zhong RenDepartment of Chemistry, University of Illinois Chicago, Chicago, IL 60607, USA.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Many microorganisms can harvest energy from sunlight to establish an electrochemical potential gradient across cell membranes by pumping protons. In addition to their pumping mechanisms, these ion pumps must also effectively counter the constant threat of gradient-driven backflow at the molecular level. A recent study (Ren, PNAS Nexus 1, pgac103, 2022) unscrambled the mixed structural signals in femtosecond serial crystallographic datasets and delineated the molecular mechanism of retinal photoisomerization in bacteriorhodopsin, a model system for light-driven proton pumps. This study continues to resolve structural heterogeneity, substantially improves the quality of electron density maps, and provides a clear visualization of the isolated intermediate states from I to M. These intermediate structures reveal the motion of an intramolecular seal at work, which constantly partitions the cytoplasmic and extracellular half-channels, thus preventing proton backflow.

Indexed as

BiophysicsCrystallographyStructural biology

Identifiers

PMID42088367
PMCPMC13138192

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.