Evidence map›Paper›PMID 42087411›Full record

ArticleMicrobial biotechnology2026

Machine Learning Reveals Quantitative Amino Acid Preferences in Bifidobacterium longum Growth.

Hiroki Kaneko, Kana Kadowaki, Shin Yoshimoto, Toshitaka Odamaki, Bei-Wen Ying

Abstract read
In one paragraph

Article in Microbial biotechnology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Hiroki KanekoBiotics Research Institute, Morinaga Milk Industry co., Ltd., Zama, Kanagawa, Japan.ORCID https://orcid.org/0009-0003-7337-9496
Kana KadowakiBiotics Research Institute, Morinaga Milk Industry co., Ltd., Zama, Kanagawa, Japan.ORCID https://orcid.org/0009-0006-5968-8366
Shin YoshimotoBiotics Research Institute, Morinaga Milk Industry co., Ltd., Zama, Kanagawa, Japan.ORCID https://orcid.org/0000-0001-8405-0301
Toshitaka OdamakiBiotics Research Institute, Morinaga Milk Industry co., Ltd., Zama, Kanagawa, Japan.ORCID https://orcid.org/0000-0001-6019-9240
Bei-Wen YingSchool of Life and Environmental Sciences, University of Tsukuba, Tsukuba, Ibaraki, Japan.ORCID https://orcid.org/0000-0003-2517-5686

Funding

Morinaga Milk Industry
6 · The paper itself

Abstract

Bifidobacterium longum is a prevalent human gut symbiont whose carbohydrate metabolism is well characterized, whereas the quantitative contribution of amino acids to growth remains unclear. Here, we combined genome-based pathway analysis, growth phenotyping in chemically defined media, and iterative machine-learning-guided medium design to quantify amino acid preferences in B. longum subsp. longum JCM 1217

Indexed as

Amino AcidsBifidobacterium longumCulture MediaMachine LearningCysteineGlucoseAmino AcidsCulture MediaCysteineGlucoseamino acidBifidobacteriumculture mediummachine learning

Identifiers

PMID42087411
PMCPMC13144548

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.