Evidence map›Paper›PMID 42084485›Full record

ArticleProtein science : a publication of the Protein Society2026

Analysis of the heterogenous structural states of the hexameric ATPase PilU of the type IV pili from Vibrio cholerae.

Yirui Guo, Shantanu Shukla, George Minasov, Nicole L Inniss, Thomas Klose, Valerie L Tokars, Alfonso Mondragón, Zbyszek Otwinowski, Dominika Borek, Karla J F Satchell

Abstract read
In one paragraph

Article in Protein science : a publication of the Protein Society, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Cryo-EM structure of detergent-boundbioRxiv : the preprint server for biology · 2026
    Article
  3. Structural modeling reveals the mechanism of motor ATPase coordination during type IV pilus retraction.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  4. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors.

Yirui GuoDepartment of Biophysics, The University of Texas Southwestern Medical Center, Dallas, Texas, USA.ORCID 0000-0001-7705-5454
Shantanu ShuklaDepartment of Microbiology-Immunology, Northwestern University Feinberg School of Medicine, Chicago, Illinois, USA.ORCID 0000-0002-5473-0207
George MinasovDepartment of Microbiology-Immunology, Northwestern University Feinberg School of Medicine, Chicago, Illinois, USA.
Nicole L InnissDepartment of Microbiology-Immunology, Northwestern University Feinberg School of Medicine, Chicago, Illinois, USA.
Thomas KloseCenter for Structural Biology of Infectious Diseases, Northwestern University Feinberg School of Medicine, Chicago, Illinois, USA.
Valerie L TokarsDepartment of Pharmacology, Northwestern University Feinberg School of Medicine, Chicago, Illinois, USA.
Alfonso MondragónDepartment of Molecular Biosciences, Northwestern University, Evanston, Illinois, USA.
Zbyszek OtwinowskiDepartment of Biophysics, The University of Texas Southwestern Medical Center, Dallas, Texas, USA.
Dominika BorekDepartment of Biophysics, The University of Texas Southwestern Medical Center, Dallas, Texas, USA.ORCID 0000-0002-4321-6253
Karla J F SatchellDepartment of Microbiology-Immunology, Northwestern University Feinberg School of Medicine, Chicago, Illinois, USA.

Funding

Tumor Environment and Metastasis (TEAM) Research ProgramP30CA060553 · NCI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI LEONIDAS C. PLATANIAS · 1993 to 2026
$153.9M
TO PROVIDE SCIENTIFIC SUPPORT TO THE CENTERS FOR RESEARCH ON STRUCTURAL BIOLOGY OF INFECTIOUS DISEASES.75N93022C00035 · NIAID · NORTHWESTERN UNIVERSITY AT CHICAGO · PI SATCHELL, KARLA · 2022 to 2025
$20.7M
Structural and biophysical studies of proteins, nucleic acids, and their complexesR35GM118108 · NIGMS · NORTHWESTERN UNIVERSITY · PI Alfonso Mondragon · 2017 to 2026
$5.4M
From complex data to complex structures: new methods for structural biologyR35GM145365 · NIGMS · UT SOUTHWESTERN MEDICAL CENTER · PI ZBYSZEK OTWINOWSKI · 2022 to 2026
$2.3M
Michigan Economic Development Corporation 085P1000817NCI NIH HHS P30 CA060553NIAID NIH HHS HHSN272201700060CNIGMS NIH HHS R35 GM118108NIGMS NIH HHS R35 GM145365NIH HHS 75N93022C00035ODCDC CDC HHS 75N93022C00035Robert H. Lurie Comprehensive Cancer Center NCI P30CA060553U.S. Department of Energy DE-AC02-06CH11357
6 · The paper itself

Abstract

Type IV pili (T4P) mediate surface motility, host interactions, and DNA uptake through cycles of extension and retraction. While the primary retraction ATPase PilT has been extensively characterized, its homolog PilU remains less well understood despite being demonstrated as a PilT-dependent retraction ATPase. Here, we determined six PilU structures by cryo-electron microscopy and x-ray crystallography. The structures reveal a homohexameric assembly stabilized by interactions between the C-terminal catalytic domain of one subunit and the N-terminal PAS-like domain of a neighboring subunit. PilU adopts multiple conformational states, exhibiting different combinations of open and closed interfaces even in the absence of nucleotide. Comparison with PilT highlights structural features that likely underlie PilU's weak ATPase activity and its dependence on PilT for function. Together, these findings provide a structural framework for understanding PilU's role within the T4P retraction machinery.

Indexed as

Adenosine TriphosphatasesFimbriae, BacterialFimbriae ProteinsVibrio choleraeCryoelectron MicroscopyCrystallography, X-RayModels, MolecularProtein ConformationProtein MultimerizationAdenosine TriphosphatasesFimbriae ProteinsATPasecryoEMpilus retractionType IV pilivibrio choleraeX‐ray, structure

Identifiers

PMID42084485
PMCPMC13142100

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.