Evidence map›Paper›PMID 42083001›Full record

ReviewHuman genomics2026

AI-driven integration of genomic and exposome data for cancer risk: the combined risk score (CRS).

Dimosthenis Sarigiannis, Ioannis Boukovinas, Maria Kaparelou, Athanasios-Meletios Dimopoulos, Theodora Psaltopoulou, Kenneth J Pienta, Ourania Anesti, Spyros Karakitsios

Abstract readReview
In one paragraph

Review in Human genomics, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Dimosthenis SarigiannisNational Hellenic Research Foundation, 48 Vassileos Constantinou Avenue, 11635, Athens, Greece. sarigiannis@eie.gr.
Ioannis BoukovinasOncology Unit, Genesis Clinic, 55535, Thessaloniki, Greece.
Maria KaparelouDepartment of Clinical Therapeutics, School of Medicine, National and Kapodistrian University of Athens, Athens, Greece.
Athanasios-Meletios DimopoulosDepartment of Clinical Therapeutics, School of Medicine, National and Kapodistrian University of Athens, Athens, Greece.
Theodora PsaltopoulouDepartment of Epidemiology, School of Medicine, National and Kapodistrian University of Athens, Athens, Greece.
Kenneth J PientaThe Brady Urological Institute, Johns Hopkins School of Medicine, Baltimore, MD, USA.
Ourania AnestiHERACLES Research Center on the Exposome and Health, Center for Interdisciplinary Research and Innovation, Aristotle University of Thessaloniki, Balkan Center, Bldg. B, 10th km Thessaloniki-Thermi Road, 57001, Thessaloniki, Greece.
Spyros KarakitsiosNational Hellenic Research Foundation, 48 Vassileos Constantinou Avenue, 11635, Athens, Greece.

Funding

European Commission 101157269European Union 101157269
6 · The paper itself

Abstract

Polygenic risk scores (PRS) have emerged as important tools for quantifying inherited susceptibility to cancer, and are increasingly combined with environmental and lifestyle factors into composite risk scores (CRS). In this context, environmental inputs should be understood not as isolated covariates, but as components of the human exposome, encompassing cumulative, time-varying, and interacting exposures across the life course, which fundamentally shape cancer risk alongside inherited susceptibility. These approaches are often discussed as candidates for precision prevention and screening, yet their evidentiary basis spans heterogeneous study designs, outcomes, and methodological assumptions. Here, we provide an integrated review of genetic, environmental, and composite cancer risk models, explicitly distinguishing etiologic association from predictive performance and clinical translation. We synthesize evidence from large genome-wide association studies, cohort and case-control analyses, and recent CRS evaluations using both narrative assessment and structured quantitative summaries. Across cancer sites, PRS and CRS consistently stratify relative risk, with monotonic increases in odds ratios across score percentiles. However, gains in discrimination metrics such as the area under the curve or C-index are generally modest and heterogeneous, and calibration performance varies substantially across populations and settings. External validation and multi-ancestry evaluations remain limited, and methodological challenges, including overfitting, population stratification, and model transportability, are frequently under-reported. We argue that current evidence supports the use of PRS and CRS primarily as tools for risk stratification, prioritization, and risk-enriched research designs, rather than as stand-alone clinical decision systems. The most near-term translational value lies in targeted screening strategies, prevention trials, and population-level risk assessment, provided that calibration, governance, and equity considerations are explicitly addressed. We conclude by outlining key methodological and data requirements needed to advance CRS from exploratory models toward robust, population-appropriate tools in cancer prevention.

Indexed as

Artificial IntelligenceExposomeGenomicsNeoplasmsGenetic Predisposition to DiseaseGenetic Risk ScoreGenome-Wide Association StudyHumansRisk AssessmentRisk FactorsCancer risk predictionCombined risk scoreEnvironmental risk factorsExposomeMachine learningPolygenic risk scores

Identifiers

PMID42083001
PMCPMC13289478

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.