Evidence map›Paper›PMID 42080265›Full record

ArticleNucleic acids research2026

Zα and Zβ domains of ADAR1 and ZBP1 bind G-quadruplexes with nanomolar affinities, establishing Zβ as a G-quadruplex-specific domain.

Charles W Kroft, Jeffrey B Krall, Michael Warchol, Robb Welty, Alan Herbert, Morkos A Henen, Beat Vögeli

Abstract read
In one paragraph

Article in Nucleic acids research, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors.

Charles W KroftDepartment of Biochemistry and Molecular Genetics, School of Medicine, University of Colorado Anschutz Medical Campus, Aurora, CO 80045, United States.
Jeffrey B KrallDepartment of Biochemistry and Molecular Genetics, School of Medicine, University of Colorado Anschutz Medical Campus, Aurora, CO 80045, United States.
Michael WarcholDepartment of Biochemistry and Molecular Genetics, School of Medicine, University of Colorado Anschutz Medical Campus, Aurora, CO 80045, United States.
Robb WeltyDepartment of Biochemistry and Molecular Genetics, School of Medicine, University of Colorado Anschutz Medical Campus, Aurora, CO 80045, United States.
Alan HerbertDiscovery, InsideOutBio, 42 8th Street, Unit 3412, Charlestown, MA 02129, United States.ORCID 0000-0002-0093-1572
Morkos A HenenDepartment of Biochemistry and Molecular Genetics, School of Medicine, University of Colorado Anschutz Medical Campus, Aurora, CO 80045, United States.ORCID 0000-0003-4835-5583
Beat VögeliDepartment of Biochemistry and Molecular Genetics, School of Medicine, University of Colorado Anschutz Medical Campus, Aurora, CO 80045, United States.ORCID 0000-0003-1176-3137

Funding

University of Colorado Cancer Center Support Grant - Lung Cancer Patient-Derived Xenografts with Autologous Human Immune SystemsP30CA046934 · NCI · UNIVERSITY OF COLORADO DENVER · PI James V Degregori · 1988 to 2026
$117.0M
Molecular recognition by ADAR1 of Z-RNA within transcriptomesR01GM150642 · NIGMS · UNIVERSITY OF HOUSTON · PI Quentin Vicens, Beat Rolf Vogeli · 2023 to 2026
$1.2M
Functional protein disorder in intracellular transportR35GM156171 · NIGMS · UNIVERSITY OF COLORADO DENVER · PI Beat Rolf Vogeli · 2025 to 2026
$530k
600 MHz NMR console and cold probeS10OD025020 · OD · UNIVERSITY OF COLORADO DENVER · PI JONES, DAVID NIGEL · 2018 to 2018
$501k
Biomedical Research Support S10 OD025020-01NCI NIH HHS P30 CA046934NIGMS NIH HHS R01 GM150642NIGMS NIH HHS R35 GM156171NIH HHS R01 GM150642NIH HHS R35GM156171NIH HHS S10 OD025020NSF #2153787
6 · The paper itself

Abstract

While it is well established that the Zα domains of ADAR1 and ZBP1 proteins bind Z-form-prone nucleic acids (Z-NAs), it has also been shown that the Zα domain of ADAR1 binds DNA G-quadruplexes (GQs). However, no binding partner of the structurally homologous Zβ domain of ADAR1 has been identified to date. Based on AlphaFold and molecular dynamics simulations, it has recently been suggested that Zβ of ADAR1 targets its substrate by recognizing GQs. Here, we provide the first experimental evidence for Zβ binding to select GQ RNA and DNA in vitro, with structural specificity and nanomolar affinity. We also demonstrate that the Zα domains of ZBP1 and ADAR1 bind to both DNA and RNA GQs with similar affinity. These findings extend the range of potential functional roles for these proteins and open new hypotheses for testing in cells.

Indexed as

Adenosine DeaminaseG-QuadruplexesRNA-Binding ProteinsBinding SitesDNAHumansMolecular Dynamics SimulationProtein BindingProtein DomainsRNAADAR protein, humanAdenosine DeaminaseDNARNARNA-Binding ProteinsZBP1 protein, human

Identifiers

PMID42080265
PMCPMC13136903

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.