Evidence map›Paper›PMID 42080256›Full record

ArticleNucleic acids research2026

The tRNA dihydrouridine synthase DusA has a distinct mechanism in optimizing tRNAs for translation.

Sarah K Schultz, Nadia Hossain, Lauren Barnes, Tirathjot Kaur, Kristin S Koutmou, Ute Kothe

Abstract read
In one paragraph

Article in Nucleic acids research, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Sarah K SchultzDepartment of Chemistry, University of Manitoba, Winnipeg MB R3T 2N2, Canada.
Nadia HossainDepartment of Chemistry, University of Manitoba, Winnipeg MB R3T 2N2, Canada.
Lauren BarnesDepartment of Chemistry, University of Michigan, Ann Arbor MI 48109, United States.
Tirathjot KaurDepartment of Chemistry, University of Manitoba, Winnipeg MB R3T 2N2, Canada.
Kristin S KoutmouDepartment of Chemistry, University of Michigan, Ann Arbor MI 48109, United States.
Ute KotheDepartment of Chemistry, University of Manitoba, Winnipeg MB R3T 2N2, Canada.ORCID 0000-0002-2744-7334

Funding

Discovery Accelerator Supplement RGPAS-2020-00010National Science Foundation CAREER 2045562Natural Sciences and Engineering Research Council of Canada RGPIN-2020-04965Natural Sciences and Engineering Research Council of Canada Discovery RGPIN-2020-04965RNA Innovation NSERC CREATE program
6 · The paper itself

Abstract

Dihydrouridine (D) is one of the most highly conserved RNA modifications across all domains of life. D20 within the tRNA D loop is particularly conserved and is formed by DusA in Escherichia coli. However, the mechanisms and cellular functions of DusA and D20 remain poorly understood. Here, we characterize DusA's role in tRNA binding, cofactor oxidation, and modification activity, along with its impact on tRNA maturation and translation. We find that DusA binds tRNA via a two-step mechanism involving a local structural rearrangement and exhibits a higher affinity for previously modified tRNA compared to unmodified tRNA. Unlike the T arm modifying enzymes TrmA and TruB, DusA does not broadly increase cellular aminoacylation for all tRNAs but enhances the charging of specific tRNA species. Despite limited alterations in overall tRNA charging and abundance in cells lacking DusA, DusA selectively improves translation at several specific codons, potentially indicating a direct contribution for dihydrouridine to the function of certain tRNAs on the ribosome. In conclusion, our findings suggest DusA acts nonredundantly with and complementary to TrmA and TruB in fine-tuning protein synthesis.

Indexed as

Escherichia coli ProteinsOxidoreductasesProtein BiosynthesisRNA, TransferEscherichia coliTransfer RNA AminoacylationUridineEscherichia coli ProteinsOxidoreductasesRNA, TransfertRNA-dihydrouridine synthaseUridine

Identifiers

PMID42080256
PMCPMC13136901

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.