ArticleFrontiers in plant science2026
Genome-wide identification and expression profiling of the
Article in Frontiers in plant science, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
0 citing papers in PubMed.
No citing paper in PubMed yet.
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
5 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Introduction: Methods: We performed genome-wide identification of GYF genes in the haplotype-phased Results: We identified 11 GYF loci represented by 22 haplotype-specific allelic copies (VpGYF1-VpGYF22). Phylogenetic analysis grouped them into three clades corresponding to ATXR3/ATXR7 SET-GYF chromatin regulators (Clade I), NERD-like multi-domain proteins (Clade II), and EXA1-like translational regulators (Clade III). Ka/Ks ratios indicated purifying selection. Promoter analysis identified abundant SA-, MeJA-, and ethylene-responsive elements alongside WRKY, MYB, and MYC/bHLH sites. VpGYF expression in fruits correlated with vanillin content, with higher expression in glucovanillin-rich inner white tissue. Following CymMV inoculation, VpGYF genes showed broad transcriptional responsiveness, with the strongest induction in VpGYF4/GYF12, VpGYF19/GYF21, and VpGYF6/GYF14. Discussion: These results implicate VpGYF genes in both secondary metabolism and potexvirus host interactions in vanilla. The infection-responsive loci are prioritized as candidates for functional validation and host factor-based resistance strategies.
Indexed as
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.