Evidence map›Paper›PMID 42071198›Full record

ArticleBMC cancer2026

Predicting prognosis and drug sensitivity in patients with hepatocellular carcinoma using an lncRNA signature associated with cuproptosis.

Yan Li, Shiyu Lv, Yunqiu Wang

Abstract read
In one paragraph

Article in BMC cancer, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

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2 · The registry

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

3 authors.

Yan LiDepartment of Clinical Laboratory Medicine, The First Affiliated Hospital of Shandong First Medical University & Shandong Provincial Qianfoshan Hospital, Shandong Medicine and Health Key Laboratory of Laboratory Medicine, Jingshi Road, Jinan, Shandong, 250014, China.
Shiyu LvDepartment of Clinical Laboratory Medicine, The First Affiliated Hospital of Shandong First Medical University & Shandong Provincial Qianfoshan Hospital, Shandong Medicine and Health Key Laboratory of Laboratory Medicine, Jingshi Road, Jinan, Shandong, 250014, China.
Yunqiu WangDepartment of Clinical Laboratory Medicine, The First Affiliated Hospital of Shandong First Medical University & Shandong Provincial Qianfoshan Hospital, Shandong Medicine and Health Key Laboratory of Laboratory Medicine, Jingshi Road, Jinan, Shandong, 250014, China. wangyunqiu@sdfmu.edu.cn.

Funding

the Beijing Science and Technology Innovation Medical Development Foundation KC2023-JX-0186-FQ028the National Natural Science Foundation Cultivating Fund from the Qianfoshan Hospital of Shandong Province QYPY2022NSFC0604the Natural Science Foundation of Shandong Province ZR2022QH290
6 · The paper itself

Abstract

backgroundHepatocellular carcinoma (HCC) is a prevalent type of malignant tumor known for its aggressive proliferation and invasive behavior. The exact molecular mechanisms underlying HCC development and progression remain unclear. Nevertheless, cuproptosis has been linked to a range of diseases, including cancers, resulting from imbalances in copper homeostasis. Here, a unique signature of long non-coding RNAs (lncRNAs) was developed, known as cuproptosis-related lncRNA (CRlncRNA). This signature has significant value in clinical practice for predicting prognosis and drug sensitivity in individuals with HCC.

methodsThe transcriptome data and clinical information were retrieved from the Cancer Genome Atlas (TCGA) database. The independent prognostic signature of five CRlncRNAs was constructed by co-expression analysis, Lasso Cox regression analysis, and univariate and multivariate Cox regression analysis. K-M analysis and ROC curve were used to evaluate the effectiveness of the signature in predicting prognosis and IC50 was used to predict the sensitivity of drugs. Furthermore, the differential expression of five CRlncRNAs was validated in clinical HCC samples, and functional in vitro experiments were performed to investigate the biological role of LINC02505, which is one of the five CRlncRNAs.

resultsBased on 374 HCC samples, a prognostic risk signature of five lncRNAs was constructed. High-risk patients showed significantly decreased survival periods, indicating that the CRlncRNA signature has predictive value in HCC. Combined with clinical and pathological information, the signature was shown to be an independent prognostic factor. Besides, the CRlncRNA signature was found to be closely associated with the efficacy of many commonly used chemotherapy drugs and targeted drugs for HCC patients. Additionally, further investigations showed that the mutation rate of HCC was related to the CRlncRNA signature, and gene enrichment analysis focused on immune-related pathways. Finally, among the CRlncRNA signature, LINC02505 was tested as a risk factor in vitro.

conclusionsThe CRlncRNA signature has significant clinical implications as it offers new biomarkers for evaluating HCC prognosis and guiding clinical medication.

Indexed as

Biomarkers, TumorCarcinoma, HepatocellularCuproptosisDrug Resistance, NeoplasmLiver NeoplasmsRNA, Long NoncodingFemaleGene Expression ProfilingGene Expression Regulation, NeoplasticHumansMalePrognosisTranscriptomeBiomarkers, TumorRNA, Long NoncodingBiomarkerCuproptosisDrug sensitivityHepatocellular carcinomaLncRNAPrognosis

Identifiers

PMID42071198
PMCPMC13285077

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.