Evidence map›Paper›PMID 42067636›Full record

ArticleNature ecology & evolution2026

Analysis of the impact of gene evolution on reproductive effects reveals prevalent sexual and germline-soma conflicts.

Shengqian Xia, Deanna Arsala, Andrea Gschwend, William Koval, Jared Atlas, Shuaibo Han, Jianhai Chen, Laura Faulere, Muzi Li, Joseph Mihaljevic and 6 more

Abstract read
PubMed Publisher
In one paragraph

Article in Nature ecology & evolution, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

Shengqian Xia *Department of Ecology and Evolution, University of Chicago, Chicago, IL, USA. shengqianxia@uchicago.edu.ORCID http://orcid.org/0000-0002-9264-3649
Deanna Arsala *Department of Ecology and Evolution, University of Chicago, Chicago, IL, USA.
Andrea Gschwend *Department of Ecology and Evolution, University of Chicago, Chicago, IL, USA.ORCID http://orcid.org/0000-0002-6208-2457
William KovalDepartment of Ecology and Evolution, University of Chicago, Chicago, IL, USA.ORCID http://orcid.org/0000-0002-4035-1206
Jared AtlasDepartment of Ecology and Evolution, University of Chicago, Chicago, IL, USA.
Shuaibo HanDepartment of Ecology and Evolution, University of Chicago, Chicago, IL, USA.
Jianhai ChenDepartment of Ecology and Evolution, University of Chicago, Chicago, IL, USA.ORCID http://orcid.org/0000-0003-0093-2003
Laura FaulereDepartment of Ecology and Evolution, University of Chicago, Chicago, IL, USA.
Muzi LiDepartment of Organismal Biology and Anatomy, University of Chicago, Chicago, IL, USA.ORCID http://orcid.org/0000-0001-8194-5214
Joseph MihaljevicDepartment of Ecology and Evolution, University of Chicago, Chicago, IL, USA.
Daniel J SanchezDepartment of Ecology and Evolution, University of Chicago, Chicago, IL, USA.
Grace Rui-Tong YuDepartment of Ecology and Evolution, University of Chicago, Chicago, IL, USA.
Natalia TamarinaDepartment of Ecology and Evolution, University of Chicago, Chicago, IL, USA.
Nicholas VanKurenDepartment of Ecology and Evolution, University of Chicago, Chicago, IL, USA.ORCID http://orcid.org/0000-0001-8633-8851
Stefano AllesinaDepartment of Ecology and Evolution, University of Chicago, Chicago, IL, USA.ORCID http://orcid.org/0000-0003-0313-8374
Manyuan LongDepartment of Ecology and Evolution, University of Chicago, Chicago, IL, USA. mlong@uchicago.edu.ORCID http://orcid.org/0000-0002-6755-197X

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Functional innovation is conventionally viewed as a consequence of natural selection for environmental adaptation. However, impacts of other evolutionary forces, including genetic conflicts, have not been explored through direct manipulations of individual genes when assessing overall genetic basis of fitness. Here we conducted a comprehensive RNA interference screen targeting 125 young and old genes in somatic and germline tissues of male and female Drosophila melanogaster, plus CRISPR knockouts of some genes. We analysed sex-specific adult fitness effects, fertility phenotypes of central importance in evolution, in a total of 732,710 adult offspring scored from over 15,000 repeated knockdown crosses and controls. Bayesian statistical analysis of the fitness data revealed that 62.6% of the young and old genes that underwent somatic knockdowns reveal remarkable intralocus sexual conflict with the vast majority being male advantageous and female detrimental, as knockdowns are male detrimental and female beneficial. Germline knockdowns detected a majority of genes with adaptive sexual concordance and over a quarter of genes under sexual antagonism mostly female advantageous and male detrimental. We also detected 36.7% of young genes that have strong effects in both germline and soma exhibit tissue conflicts within sex although female effects are stronger. These analyses of sex-specific distributions of fitness effects reveal a prevalent role for antagonistic selection between sexes and tissues, while finding no association between chromosomal locations and sexually antagonistic genes, nor with sex-biased expression and gene age.

Indexed as

Drosophila melanogasterEvolution, MolecularGenetic FitnessAnimalsFemaleGerm CellsMaleReproductionRNA InterferenceSelection, Genetic

Identifiers

PMID42067636

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.