Evidence map›Paper›PMID 42065182›Full record

ArticleMedicine2026

Predicting diagnostic gene biomarkers in allergic asthma.

Weihua Liu, Shuanglan Xu, Quan He

Abstract read
In one paragraph

Article in Medicine, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

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4 · The record

Corrections and comments

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5 · Who and what money

Authors and funding

3 authors.

Weihua LiuDepartment of Respiratory and Critical Care Medicine, The First Affiliated Hospital, Nanjing Medical University, Nanjing, Jiangsu, China.
Shuanglan XuDepartment of Respiratory and Critical Care Medicine, The Affiliated Hospital of Yunnan University, The Second People's Hospital of Yunnan Province, Kunming, China.
Quan HeDepartment of Respiratory and Critical Care Medicine, Zhenjiang Hospital of Chinese Traditional and Western Medicine, Zhenjiang, Jiangsu, China.

Funding

Jiangsu Province Postgraduate Research and Practice Innovation Program JX10214039Jiangsu Senile Health Research project LK2021057TCM Science and Technology Development Program of Jiangsu Province MS2022125Zhenjiang Key Research and Development project SH2022081
6 · The paper itself

Abstract

backgroundAllergic asthma (AA) is a heterogeneous chronic inflammatory airway disorder. In this study, we performed a retrospective bioinformatics analysis based on public transcriptome datasets to identify critical genes associated with immune cell infiltration in AA and to establish a novel predictive model.

methodsTwo transcriptome datasets (GSE73482 and GSE40889) were analyzed to explore key genes implicated in AA. Functional enrichment analyses, including Gene Ontology and Kyoto Encyclopedia of Genes and Genomes pathway analyses, were performed using Metascape. Least absolute shrinkage and selection operator regression was applied to screen feature genes and construct a diagnostic prediction model. Weighted gene co-expression network analysis (WGCNA) was conducted to identify AA-related gene modules. The fractions of infiltrating immune cells were estimated using single-sample gene set enrichment analysis (ssGSEA). Gene set variation analysis and gene set enrichment analysis (GSEA) were performed to explore the biological functions and related signaling pathways of the key genes. The Cistrome Data Browser database was used to predict transcription factors that potentially regulate these key genes.

resultsWe identified 4 highly significant genes in the brown module: membrane associated O acetyltransferase 1 (MBOAT1), leucine rich repeats and immunoglobulin-like domains 1 (LRIG1), LOC401357, and G protein regulated inducer of neurite outgrowth 3 (GPRIN3). GSEA results revealed that these key genes were significantly enriched in multiple immune-related signaling pathways. To further explore the regulatory network of these genes, transcription factors were predicted using the Cistrome Data Browser database, and the regulatory network was visualized using Cytoscape software.

conclusionMBOAT1, LRIG1, LOC401357, and GPRIN3 are candidate AA-associated genes identified through retrospective modeling. The identification of these genes offers potential opportunities to utilize them as biomarkers and targets for immunotherapy in AA.

Indexed as

AsthmaBiomarkersComputational BiologyGene Expression ProfilingGene Regulatory NetworksGenetic MarkersHumansTranscriptomeBiomarkersGenetic Markersallergic asthmaexternal validationimmune infiltrationkey genetranscriptomic biomarkerWGCNA

Identifiers

PMID42065182
PMCPMC13138493

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