Evidence map›Paper›PMID 42064299›Full record

ArticleFrontiers in plant science2026

Elucidation of the

Chellappan Padmanabhan, Qiyue Ma, Md Shamimuzzaman, Kevin S Stewart, Jennifer R Wilson, Daniel K Hasegawa, Reza Shekasteband, Samuel F Hutton, John W Scott, Alvin M Simmons and 2 more

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Frontiers in plant science, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Chellappan PadmanabhanU.S. Vegetable Laboratory, U.S. Department of Agriculture - Agricultural Research Service, Charleston, SC, United States.
Qiyue MaBoyce Thompson Institute, Cornell University, Ithaca, NY, United States.
Md ShamimuzzamanAgroecosystem Management Research Unit, U.S. Department of Agriculture - Agricultural Research Service, Lincoln, NE, United States.
Kevin S StewartU.S. Vegetable Laboratory, U.S. Department of Agriculture - Agricultural Research Service, Charleston, SC, United States.
Jennifer R WilsonU.S. Vegetable Laboratory, U.S. Department of Agriculture - Agricultural Research Service, Charleston, SC, United States.
Daniel K HasegawaU.S. Vegetable Laboratory, U.S. Department of Agriculture - Agricultural Research Service, Charleston, SC, United States.
Reza ShekastebandGulf Coast Research and Education Center, Institute of Food and Agricultural Sciences, University of Florida, Wimauma, FL, United States.
Samuel F HuttonGulf Coast Research and Education Center, Institute of Food and Agricultural Sciences, University of Florida, Wimauma, FL, United States.
John W ScottGulf Coast Research and Education Center, Institute of Food and Agricultural Sciences, University of Florida, Wimauma, FL, United States.
Alvin M SimmonsU.S. Vegetable Laboratory, U.S. Department of Agriculture - Agricultural Research Service, Charleston, SC, United States.
Zhangjun FeiBoyce Thompson Institute, Cornell University, Ithaca, NY, United States.
Kai-Shu LingU.S. Vegetable Laboratory, U.S. Department of Agriculture - Agricultural Research Service, Charleston, SC, United States.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Introduction: Tomato yellow leaf curl virus (TYLCV, Methods: In this study, we conducted a global transcriptome analysis to compare gene expression in a Results: We identified 1,394 differentially expressed genes, including numerous defense-related genes and genes involved in RNA-mediated DNA methylation. In addition, the expression of key regulatory genes such as protein kinases (PKs) and transcription factors (TFs) was also significantly altered. To explore the function of one upregulated TF encoding an APETALA2/Ethylene Responsive Factor (AP2/ERF), tomato plants overexpressing this gene were generated and demonstrated to confer resistance to TYLCV. Discussion: These results lead us to hypothesize that

Indexed as

APETALA2/ethylene responsive factorDNA methylationRNA-dependent RNA polymerasetomato yellow leaf curl virustranscriptome profilingty-5 resistance

Identifiers

PMID42064299
PMCPMC13124728

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.