Evidence map›Paper›PMID 42062273›Full record

ArticleNature communications2026

Probing the zooarchaeological record across time and space for ancient pathogen DNA.

Anne Kathrine W Runge, Ian Light-Maka, Ken Massy, Marcel Keller, Simon Trixl, Helja Kabral, Casey L Kirkpatrick, Kirsten Bos, Jana Eger, Michal Ernée and 23 more

Abstract read
In one paragraph

Article in Nature communications, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

33 authors.

Anne Kathrine W RungeEvolutionary Pathogenomics, Max Planck Institute for Infection Biology, Berlin, Germany. ak@palaeome.org.ORCID 0000-0003-2421-4831
Ian Light-MakaEvolutionary Pathogenomics, Max Planck Institute for Infection Biology, Berlin, Germany.ORCID 0000-0001-6720-3732
Ken MassyInstitute for Pre- and Protohistoric Archaeology and Archaeology of the Roman Provinces, Ludwig Maximilian University Munich, Munich, Germany.ORCID 0000-0002-7724-0702
Marcel KellerEstonian Biocentre, Institute of Genomics, University of Tartu, Tartu, Estonia.ORCID 0000-0001-9668-6817
Simon TrixlState Office for Cultural Heritage Management Baden-Württemberg, Osteology Working Group, Konstanz, Germany.ORCID 0000-0003-4303-3008
Helja KabralEstonian Biocentre, Institute of Genomics, University of Tartu, Tartu, Estonia.ORCID 0009-0003-6068-0650
Casey L KirkpatrickDepartment of Archaeology, Simon Fraser University, Burnaby, BC, Canada.ORCID 0000-0001-9755-6459
Kirsten BosDepartment for Archaeogenetics, Max Planck Institute for Evolutionary Anthropology, Leipzig, Germany.ORCID 0000-0003-2937-3006
Jana EgerCurt-Engelhorn-Centre Archaeometry, Mannheim, Germany.ORCID 0000-0002-9856-6429
Michal ErnéeDepartment of Prehistoric Archaeology, Institute of Archaeology, Czech Academy of Sciences, Prague, Czech Republic.ORCID 0000-0003-4847-8532
René KyselýDepartment of Natural Sciences and Archaeometry, Institute of Archaeology, Czech Academy of Sciences, Prague, Czech Republic.ORCID 0000-0002-0788-7287
Michael HochmuthNatural Sciences Department, Archaeozoology Laboratory, German Archaeological Institute, Berlin, Germany.
Dominik PoradowskiDepartment of Biostructure and Animal Physiology, Faculty of Veterinary Medicine, Wrocław University of Environmental and Life Sciences, Wrocław, Poland.
Aleksander ChrószczDepartment of Biostructure and Animal Physiology, Faculty of Veterinary Medicine, Wrocław University of Environmental and Life Sciences, Wrocław, Poland.
Norbert BeneckeEurasia-Department, German Archaeological Institute, Berlin, Germany.
David DaněčekCentral Bohemian Museum in Roztoky, Roztoky, Czech Republic.ORCID 0000-0002-2208-8774
Jana KlementováCentral Bohemian Museum in Roztoky, Roztoky, Czech Republic.
Anatoli NaglerEurasia-Department, German Archaeological Institute, Berlin, Germany.
Alexey A KalmykovIndependent researcher, Stawropol, Russian Federation.ORCID 0000-0002-6939-5544
Anatoly R KantorovichDepartment of Archaeology, Faculty of History, Lomonosov Moscow State University, Moscow, Russian Federation.
Vladimir E MaslovInstitute of Archaeology RAS, Moscow, Russian Federation.
Andrey B BelinskiyNasledie Cultural Heritage Unit, Stawropol, Russian Federation.
Christiana L ScheibEstonian Biocentre, Institute of Genomics, University of Tartu, Tartu, Estonia.
Meda ToderaşVasile Pârvan Institute of Archaeology, Romanian Academy, Bucharest, Romania.
Svend HansenEurasia-Department, German Archaeological Institute, Berlin, Germany.ORCID 0000-0002-6714-4629
Philipp W StockhammerInstitute for Pre- and Protohistoric Archaeology and Archaeology of the Roman Provinces, Ludwig Maximilian University Munich, Munich, Germany.ORCID 0000-0003-4702-9372
Kai KaniuthInstitute of Near Eastern Archaeology, Ludwig-Maximilians-University, Munich, Germany.ORCID 0000-0002-6892-0917
Regina UhlEurasia-Department, German Archaeological Institute, Berlin, Germany.
Sabine ReinholdEurasia-Department, German Archaeological Institute, Berlin, Germany.ORCID 0000-0002-8107-6300
Rosalind E GillisNatural Sciences Department, Archaeozoology Laboratory, German Archaeological Institute, Berlin, Germany.ORCID 0000-0002-2370-7311
Elizabeth A NelsonDepartment of Anthropology, Dedman College of Humanities and Sciences, Southern Methodist University, Dallas, TX, USA.
Kamilla PawłowskaDepartment of Palaeoenvironmental Research, Institute of Geology, Adam Mickiewicz University, Poznań, Poznań, Poland. koka@amu.edu.pl.ORCID 0000-0002-4103-4501
Felix M KeyEvolutionary Pathogenomics, Max Planck Institute for Infection Biology, Berlin, Germany. key@mpiib-berlin.mpg.de.ORCID 0000-0003-2812-6636

Funding

Klaus Tschira Stiftung (Klaus Tschira Foundation) GSO/KT030
6 · The paper itself

Abstract

Zoonoses are among the greatest threats to human health, with many zoonotic pathogens believed to have emerged following the Neolithic transition. Palaeomicrobiological investigations of the zooarchaeological record hold potential to uncover the reservoirs, host ranges, and host adaptations of zoonotic pathogens in the past, but face challenges in identifying promising specimens and pathogen DNA preservation. We perform palaeopathological and genetic examinations of 346 skeletal elements from domesticated and wild animals collected from 34 Eurasian sites dating across the last six millennia. We identify 116 signatures of 29 ancient (opportunistic) pathogens and find support that palaeopathological lesions provide guidance for specimen selection. For two pathogen species, Erysipelothrix rhusiopathiae and Streptococcus lutetiensis, we confirm their ancient authenticity using phylogenetics, showcasing an approach to explore the relationship between ancient low-coverage genomes and their modern-day relatives. Our work presents a pathway to understanding prehistoric zoonotic diseases by integrating zooarchaeological, palaeopathological, and genetic data.

Indexed as

DNA, AncientDNA, BacterialFossilsStreptococcusZoonosesAnimalsArchaeologyHumansPaleopathologyPhylogenyDNA, AncientDNA, Bacterial

Identifiers

PMID42062273
PMCPMC13133277

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.