Evidence map›Paper›PMID 42059392›Full record

ArticleMicrobiology spectrum2026

Development of a high-throughput growth assay for bacteria or yeasts using an agar-based insoluble carbon source immobilization method.

Jiabao Liang, Isabella S Naimi, Achala Narayanan, François Maillard, Peter G Kennedy, Jeffrey G Gardner

Abstract read
In one paragraph

Article in Microbiology spectrum, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Jiabao Liang *Department of Biological Sciences, University of Maryland - Baltimore County, Baltimore, Maryland, USA.
Isabella S Naimi *Department of Biological Sciences, University of Maryland - Baltimore County, Baltimore, Maryland, USA.
Achala NarayananDepartment of Plant and Microbial Biology, University of Minnesota, St. Paul, Minnesota, USA.
François MaillardDepartment of Biology, Lund University, Lund, Sweden.
Peter G KennedyDepartment of Plant and Microbial Biology, University of Minnesota, St. Paul, Minnesota, USA.ORCID 0000-0003-2615-3892
Jeffrey G GardnerDepartment of Biological Sciences, University of Maryland - Baltimore County, Baltimore, Maryland, USA.ORCID 0000-0001-6376-1219

Funding

Characterization of bacterial enzymes that depolymerize fungal cell wall polysaccharidesR01GM147142 · NIGMS · UNIVERSITY OF MARYLAND BALTIMORE COUNTY · PI GARDNER, JEFFREY · 2022 to 2025
$1.3M
National Science Foundation 2038304NIGMS NIH HHS R01 GM147142NIGMS NIH HHS R01GM147142
6 · The paper itself

Abstract

Polysaccharide degradation by microorganisms is essential in driving global nutrient cycling, developing renewable fuels or chemicals, and promoting human gut health. However, complex polysaccharides are often insoluble, making it challenging to study degradation with soluble enzymes or to measure microbial growth. Several protocols exist to address this challenge, including 3D-printed biomass containment devices or agar capture systems to facilitate the study of insoluble carbohydrate degradation. While these methods are functional, they are constrained by variable substrate loading and time-consuming preparation. To address these shortcomings, a 3D-printed pipette was designed and tested as part of a newly developed agar immobilization method to quantitatively monitor the degradation of insoluble polysaccharides for a 96-well microtiter assay. The pipette and method were validated via two mechanisms. First, growth analyses of

Indexed as

BacteriaCarbonCellvibrioHigh-Throughput Screening AssaysYeastsAgarBiomassCulture MediaPolysaccharidesPrinting, Three-DimensionalAgarCarbonCulture MediaPolysaccharides3D printingcarbohydrateCellvibrio japonicuschitinglycanpectinpolysaccharide

Identifiers

PMID42059392
PMCPMC13227985

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.