Evidence map›Paper›PMID 42059071›Full record

ArticleJournal of medical virology2026

KSHV Genome in Saliva, Whole Blood and Kaposi's Sarcoma Biopsy Specimens in Republic of Congo: Phylogenetic Analysis and an APOBEC3B Mutational Signature.

Gervillien Arnold Malonga, Valentin Leducq, Antoine Fauchois, Dimitry Moudiongui Mboungou Malanda, Patrina Joseph Iloukou Mayakia, Juthèce Private Malanda-Kiminou, Ferdinand Emaniel Brel Got, Fabien Gaël Mouamba, Vincent Calvez, Jean Felix Peko and 2 more

Abstract read
In one paragraph

Article in Journal of medical virology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Gervillien Arnold MalongaSorbonne Université, INSERM, Institut Pierre Louis d'Epidémiologie et de Santé Publique, Assistance Publique - Hôpitaux de Paris (AP-HP), Hôpitaux Universitaires Pitié-Salpêtrière - Charles Foix, Laboratoire de Virologie, Paris, France.ORCID https://orcid.org/0000-0003-1840-951X
Valentin LeducqSorbonne Université, INSERM, Institut Pierre Louis d'Epidémiologie et de Santé Publique, Assistance Publique - Hôpitaux de Paris (AP-HP), Hôpitaux Universitaires Pitié-Salpêtrière - Charles Foix, Laboratoire de Virologie, Paris, France.ORCID https://orcid.org/0000-0002-6817-6227
Antoine FauchoisSorbonne Université, INSERM, Institut Pierre Louis d'Epidémiologie et de Santé Publique, Assistance Publique - Hôpitaux de Paris (AP-HP), Hôpitaux Universitaires Pitié-Salpêtrière - Charles Foix, Laboratoire de Virologie, Paris, France.
Dimitry Moudiongui Mboungou MalandaFaculté des Sciences de la Santé, Université Marien Ngouabi, Brazzaville, Republic of Congo.ORCID https://orcid.org/0000-0002-3216-059X
Patrina Joseph Iloukou MayakiaFaculté des Sciences de la Santé, Université Marien Ngouabi, Brazzaville, Republic of Congo.ORCID https://orcid.org/0000-0002-5505-2145
Juthèce Private Malanda-KiminouFaculté des Sciences de la Santé, Université Marien Ngouabi, Brazzaville, Republic of Congo.ORCID https://orcid.org/0000-0002-3594-1228
Ferdinand Emaniel Brel GotFaculté des Sciences de la Santé, Université Marien Ngouabi, Brazzaville, Republic of Congo.ORCID https://orcid.org/0000-0003-0866-9473
Fabien Gaël MouambaFaculté des Sciences de la Santé, Université Marien Ngouabi, Brazzaville, Republic of Congo.ORCID https://orcid.org/0000-0001-7016-7488
Vincent CalvezSorbonne Université, INSERM, Institut Pierre Louis d'Epidémiologie et de Santé Publique, Assistance Publique - Hôpitaux de Paris (AP-HP), Hôpitaux Universitaires Pitié-Salpêtrière - Charles Foix, Laboratoire de Virologie, Paris, France.
Jean Felix PekoFaculté des Sciences de la Santé, Université Marien Ngouabi, Brazzaville, Republic of Congo.
Anne-Geneviève MarcelinSorbonne Université, INSERM, Institut Pierre Louis d'Epidémiologie et de Santé Publique, Assistance Publique - Hôpitaux de Paris (AP-HP), Hôpitaux Universitaires Pitié-Salpêtrière - Charles Foix, Laboratoire de Virologie, Paris, France.ORCID https://orcid.org/0000-0003-4808-8999
Aude JarySorbonne Université, INSERM, Institut Pierre Louis d'Epidémiologie et de Santé Publique, Assistance Publique - Hôpitaux de Paris (AP-HP), Hôpitaux Universitaires Pitié-Salpêtrière - Charles Foix, Laboratoire de Virologie, Paris, France.ORCID https://orcid.org/0000-0002-1952-6729

Funding

Agence nationale de recherche sur le Sida et les hépatites virales - Maladies infectieuses émergentes (ANRS-MIE).
6 · The paper itself

Abstract

Kaposi's sarcoma-associated herpesvirus (KSHV) has been associated with a variety of diseases and is endemic in Sub-Saharan Africa. We performed KSHV-whole-genome analysis and search for APOBEC-editing to describe genetic diversity in samples issued from an endemic region. We included 15 Congolese samples including 12 saliva and whole blood samples of people living with HIV and 3 KS biopsies samples, to perform KSHV qPCR and NGS Illumina followed by KSHV typing on ORFs K1 and K15. Furthermore, we looked for APOBEC3B-mutations in KSHV-whole-genome sequences. KSHV viral load was detectable in all samples and ranged from 374 to 72799 copies/10

Indexed as

BloodCytidine DeaminaseGenome, ViralHerpesvirus 8, HumanMinor Histocompatibility AntigensPhylogenySalivaSarcoma, KaposiAdultBiopsyCongoDNA, ViralFemaleGenetic VariationHIV InfectionsHumansAPOBEC3B protein, humanCytidine DeaminaseDNA, ViralMinor Histocompatibility AntigensAPOBEC3B mutationsCongoKSHVphylogenetic analysiswhole‐genome sequencing

Identifiers

PMID42059071
PMCPMC13129949

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.