Evidence map›Paper›PMID 42058034›Full record

ArticleRSC advances2026

LOESS-based normalization workflow for targeted HDL glycoproteomics in an Alzheimer's disease cohort.

Brian V Hong, Yiyun Liu, Armin Oloumi, Joanne K Agus, Yasmine Bouchibti, Lee-Way Jin, Izumi Maezawa, Danielle J Harvey, Carlito B Lebrilla, Angela M Zivkovic

Abstract read
In one paragraph

Article in RSC advances, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Brian V HongDepartment of Nutrition, University of California-Davis Davis CA 95616 USA amzivkovic@ucdavis.edu.ORCID https://orcid.org/0000-0001-7080-2744
Yiyun LiuDepartment of Chemistry, University of California-Davis Davis CA 95616 USA.
Armin OloumiDepartment of Chemistry, University of California-Davis Davis CA 95616 USA.
Joanne K AgusDepartment of Nutrition, University of California-Davis Davis CA 95616 USA amzivkovic@ucdavis.edu.
Yasmine BouchibtiDepartment of Chemistry, University of California-Davis Davis CA 95616 USA.
Lee-Way JinDepartment of Pathology and Laboratory Medicine, School of Medicine, University of California-Davis Davis CA 95817 USA.
Izumi MaezawaDepartment of Pathology and Laboratory Medicine, School of Medicine, University of California-Davis Davis CA 95817 USA.
Danielle J HarveyDepartment of Public Health Sciences, University of California-Davis Davis CA 95616 USA.
Carlito B LebrillaDepartment of Chemistry, University of California-Davis Davis CA 95616 USA.ORCID https://orcid.org/0000-0001-7190-5323
Angela M ZivkovicDepartment of Nutrition, University of California-Davis Davis CA 95616 USA amzivkovic@ucdavis.edu.ORCID https://orcid.org/0000-0002-2828-7862

Funding

Comprehensive Characterization of Glycosylation Alterations in Alzheimer’s DiseaseR01AG062240 · NIA · UNIVERSITY OF CALIFORNIA AT DAVIS · PI JIN, LEE-WAY, LEBRILLA, CARLITO B · 2018 to 2022
$3.3M
Development of a Novel Technology for Preparative Fractionation and Characterization of Lipoprotein ParticlesR01GM147545 · NIGMS · UNIVERSITY OF CALIFORNIA AT DAVIS · PI ZIVKOVIC, ANGELA M · 2022 to 2025
$1.2M
NIA NIH HHS R01 AG062240NIGMS NIH HHS R01 GM147545
6 · The paper itself

Abstract

High-density lipoprotein (HDL) carries proteins and glycoproteins involved in lipid metabolism and inflammatory regulation, yet quantitative characterization of HDL-associated peptides in Alzheimer's disease (AD) cohorts remains challenging due to small biological effect sizes superimposed on substantial technical variability. We applied a Locally Estimated Scatterplot Smoothing (LOESS)-based drift correction and internal-standard-guided normalization workflow to targeted multiple reaction monitoring (MRM) glycoproteomic data generated from HDL isolates collected from 194 participants spanning the cognitive spectrum. Of the 164 transitions originally targeted, 59 features passed quality control (QC), and 21 HDL-associated peptide and glycopeptide features showed consistent signal across all 194 samples; these 21 analytes were used for analysis. Normalization improved analytical reproducibility, reducing median HDL pooled QC coefficients of variation from 69.1% to 55.2%.

Identifiers

PMID42058034
PMCPMC13123890

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.