Evidence map›Paper›PMID 42056287›Full record

ArticleScientific reports2026

Association between red biofluorescence and microbial dysbiosis in cariogenic biofilms: an in vitro study.

Yeon-Ji Cho, Areum Kim, Hoi-In Jung, Áine M Lennon, Wolfgang Buchalla, Eun-Song Lee, Baek-Il Kim

Abstract read
In one paragraph

Article in Scientific reports, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

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0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Yeon-Ji Cho *Department of Preventive Dentistry & Public Oral Health, Yonsei University College of Dentistry, Seoul, Korea.ORCID http://orcid.org/0009-0002-4587-3676
Areum Kim *Department of Preventive Dentistry & Public Oral Health, Yonsei University College of Dentistry, Seoul, Korea.ORCID http://orcid.org/0009-0000-0345-5332
Hoi-In JungDepartment of Preventive Dentistry & Public Oral Health, BK21 FOUR Project, Yonsei University College of Dentistry, Seoul, Korea.ORCID http://orcid.org/0000-0002-1978-6926
Áine M LennonDepartment of Conservative Dentistry and Periodontology, University Hospital Regensburg, Regensburg, Germany.ORCID http://orcid.org/0000-0002-6478-0742
Wolfgang BuchallaDepartment of Conservative Dentistry and Periodontology, University Hospital Regensburg, Regensburg, Germany.ORCID http://orcid.org/0009-0006-7575-6947
Eun-Song LeeDepartment of Preventive Dentistry & Public Oral Health, BK21 FOUR Project, Yonsei University College of Dentistry, Seoul, Korea. eunsong@yuhs.ac.ORCID http://orcid.org/0000-0002-2949-4783
Baek-Il KimDepartment of Preventive Dentistry & Public Oral Health, BK21 FOUR Project, Yonsei University College of Dentistry, Seoul, Korea. drkbi@yuhs.ac.ORCID http://orcid.org/0000-0001-8234-2327

Funding

Basic Science Research Program through the National Research Foundation of Korea (NRF) RS-2023-00237396National Research Foundation of Korea RS-2025-00437009the Bio & Medical Technology Development Program of the National Research Foundation (NRF) & funded by the Korean government (MSIT) RS-2022-NR067350
6 · The paper itself

Abstract

Dental caries is driven by microbial dysbiosis rather than single pathogens. Red biofluorescence (RF), emitted from porphyrin-producing bacteria, has been proposed as a non-invasive indicator of dysbiosis. This study aimed to evaluate whether RF intensity reflects caries-related dysbiosis during in vitro biofilm maturation. Saliva-derived microcosm biofilms were grown on hydroxyapatite discs under cariogenic conditions for seven days. RF intensity was measured using Quantitative Light-induced Fluorescence-Digital (QLF-D) and fluorescent hyperspectral imaging (FHSI). Microbial composition was analyzed by 16S rRNA sequencing. A caries-related dysbiosis index was defined from eight cariogenic species consistently reported in clinical lesions. Correlations between RF intensity and dysbiosis index were assessed, and partial least squares regression (PLSR) identified taxa contributing to RF. RF intensity increased markedly with biofilm maturation (13.6-fold at day 7, p < 0.05). The dysbiosis index also rose 5.8-fold, showing a strong correlation with RF intensity (ρ = 1.00, p < 0.01). Anaerobic species such as Veillonella dispar and Granulicatella adiacens group contributed most strongly to RF expression (VIP > 1.0). RF intensity reflects both microbial compositional shifts and dysbiosis in cariogenic biofilms. RF may serve as a comprehensive, non-invasive biomarker of pathogenic biofilm activity and caries risk. This study demonstrated that RF can reflect changes in the composition of caries-related microorganisms and the level of caries-related dysbiosis during in vitro biofilm maturation.

Indexed as

BacteriaBiofilmsDental CariesDysbiosisFluorescenceHumansRNA, Ribosomal, 16SSalivaRNA, Ribosomal, 16S16S rRNA sequencingCaries-related dysbiosis indexFluorescent hyperspectral imagingMicrocosm biofilm modelQuantitative light-induced fluorescenceRed biofluorescence

Identifiers

PMID42056287
PMCPMC13328451

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.