Evidence map›Paper›PMID 42056121›Full record

ArticleNature communications2026

Structural and molecular basis of specialized translation mediated by the ribosome mRNA-binding channel.

Davide Fraticelli, Disha Gajanan Hiregange, Benjamin Weiss, Ariel Ogran, Tal Havkin-Solomon, Irene Martinez Roman, Anat Bashan, Ada Yonath, Rivka Dikstein

Abstract read
In one paragraph

Article in Nature communications, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Davide Fraticelli *Department of Biomolecular Sciences, The Weizmann Institute of Science, Rehovot, Israel.
Disha Gajanan Hiregange *Department of Chemical and Structural Biology, The Weizmann Institute of Science, Rehovot, Israel.ORCID http://orcid.org/0000-0002-1291-1624
Benjamin WeissDepartment of Biomolecular Sciences, The Weizmann Institute of Science, Rehovot, Israel.
Ariel OgranDepartment of Biomolecular Sciences, The Weizmann Institute of Science, Rehovot, Israel.
Tal Havkin-SolomonDepartment of Biomolecular Sciences, The Weizmann Institute of Science, Rehovot, Israel.
Irene Martinez RomanDepartment of Chemical and Structural Biology, The Weizmann Institute of Science, Rehovot, Israel.
Anat BashanDepartment of Chemical and Structural Biology, The Weizmann Institute of Science, Rehovot, Israel.ORCID http://orcid.org/0000-0002-7705-0466
Ada YonathDepartment of Chemical and Structural Biology, The Weizmann Institute of Science, Rehovot, Israel. ada.yonath@weizmann.ac.il.
Rivka DiksteinDepartment of Biomolecular Sciences, The Weizmann Institute of Science, Rehovot, Israel. rivka.dikstein@weizmann.ac.il.ORCID http://orcid.org/0000-0002-6251-4723

Funding

Israel Science Foundation (ISF) 1199/22
6 · The paper itself

Abstract

The ribosome mRNA channel is central to translation, yet its role in regulatory mechanisms remains unclear. Using cryo-EM of human ribosomal complexes bound to Kozak and TISU mRNAs from wild-type (WT) and RPS26/eS26 mutant (RPS26dC) cells, we demonstrate that both RPS26/eS26 and mRNA adopt distinct conformations, explaining the opposing effects of RPS26dC on their activity. Translatome studies of WT and RPS26dC reveal AUG-context-dependent changes in 48S and 80S initiation complexes and slower scanning. Downregulated mRNAs are enriched for specific AUG-upstream nucleotides and a -1-cytosine contacting 18S rRNA G1207, an interaction lost in RPS26dC. Strongly affected transcripts include replication-dependent histones, which, despite short 5'UTRs and suboptimal Kozak, exhibit robust translation activity that is RPS26/eS26-dependent. We identify a translational enhancer in the H2B 5'UTR (-16 to -9) overlapping predicted RPS26/eS26-binding sites, with a distinct ribosome-bound conformation. Exploiting these features, we engineered a high-efficiency translational cassette with minimal leaky scanning. These findings underscore the role of the ribosome's mRNA channel in selective translation and its therapeutic potential.

Indexed as

Protein BiosynthesisRibosomal ProteinsRibosomesRNA, Messenger5' Untranslated RegionsBinding SitesCryoelectron MicroscopyHistonesHumans5' Untranslated RegionsHistonesRibosomal ProteinsRNA, Messenger

Identifiers

PMID42056121
PMCPMC13334024

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.