Evidence map›Paper›PMID 42050625›Full record

ArticleMobile DNA2026

The extraordinary satellitome diversity of freshwater crayfish: a driver of genome evolution.

Lena Bonassin, Ljudevit Luka Boštjančić, Christelle Rutz, Caterina Francesconi, Leonie Schardt, Damian Baranski, Carola Greve, Lucian Pârvulescu, Višnja Besendorfer, Jelena Mlinarec and 3 more

Abstract read
In one paragraph

Article in Mobile DNA, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Lena BonassinDepartment of Computer Science, ICUBE, UMR 7357, University of Strasbourg, CNRS, Centre de Recherche en Biomédecine de Strasbourg, Rue Eugène Boeckel 1, Strasbourg, 67000, France. lena.bonassin@rptu.de.ORCID http://orcid.org/0000-0003-3987-5907
Ljudevit Luka BoštjančićDepartment of Computer Science, ICUBE, UMR 7357, University of Strasbourg, CNRS, Centre de Recherche en Biomédecine de Strasbourg, Rue Eugène Boeckel 1, Strasbourg, 67000, France.ORCID http://orcid.org/0000-0001-8941-9753
Christelle RutzDepartment of Computer Science, ICUBE, UMR 7357, University of Strasbourg, CNRS, Centre de Recherche en Biomédecine de Strasbourg, Rue Eugène Boeckel 1, Strasbourg, 67000, France.ORCID http://orcid.org/0000-0002-6028-0599
Caterina FrancesconiDepartment of Experimental Medical Science, Lund Stem Cell Center, Lund University, Sölvegatan 19, Lund, 221-84, Sweden.ORCID http://orcid.org/0000-0002-6531-1489
Leonie SchardtLOEWE Centre for Translational Biodiversity Genomics (LOEWE-TBG), Senckenberganlage 25, Frankfurt, 60325, Germany.ORCID http://orcid.org/0009-0004-8818-5384
Damian BaranskiLOEWE Centre for Translational Biodiversity Genomics (LOEWE-TBG), Senckenberganlage 25, Frankfurt, 60325, Germany.ORCID http://orcid.org/0000-0001-9671-0565
Carola GreveLOEWE Centre for Translational Biodiversity Genomics (LOEWE-TBG), Senckenberganlage 25, Frankfurt, 60325, Germany.ORCID http://orcid.org/0000-0003-4993-1378
Lucian PârvulescuDepartment of Biology, Faculty of Chemistry, Biology, Geography, West University of Timisoara, Str. Pestalozzi 16A, Timisoara, 300115, Romania.ORCID http://orcid.org/0000-0002-1528-1429
Višnja BesendorferDepartment of Biology, Faculty of Science, University of Zagreb, Horvatovac 102a, Zagreb, 10000, Croatia.ORCID http://orcid.org/0000-0001-9706-4921
Jelena MlinarecOikon Ltd.-Institute of Applied Ecology, Trg senjskih uskoka 1-2, Zagreb, 10000, Croatia.ORCID http://orcid.org/0000-0002-2627-5374
Ivana MaguireDepartment of Biology, Faculty of Science, University of Zagreb, Horvatovac 102a, Zagreb, 10000, Croatia.ORCID http://orcid.org/0000-0001-7456-8449
Kathrin Theissinger *LOEWE Centre for Translational Biodiversity Genomics (LOEWE-TBG), Senckenberganlage 25, Frankfurt, 60325, Germany.ORCID http://orcid.org/0000-0001-7255-326X
Odile Lecompte *Department of Computer Science, ICUBE, UMR 7357, University of Strasbourg, CNRS, Centre de Recherche en Biomédecine de Strasbourg, Rue Eugène Boeckel 1, Strasbourg, 67000, France.ORCID http://orcid.org/0000-0002-2005-460X

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundRepetitive elements, particularly satellite DNA (satDNA), play a significant role in genome evolution and organisation. However, their diversity and evolutionary dynamics remain poorly understood in non-model organisms. Freshwater crayfish (Decapoda, Astacidea) have large genomes with a high chromosome number and are rich in satDNAs. This makes them attractive for studying the impact of satDNA on genome evolution.

resultsIn this study, we investigated the repetitive genomic landscape of 19 species representing four freshwater crayfish families. Our analysis revealed a high proportion of repetitive DNA in all studied species, with the total repeat content ranging from 30% to 66%. The number of satDNA families was remarkably high (54–622 families per species), with minisatellites (< 100 bp) forming the largest component of the satellitome. Family-specific patterns emerged: Astacidae and Cambaroididae showed the highest satDNA proportions, while Cambaridae and Parastacidae were dominated by Class I transposable elements. Species of the family Parastacidae showed the largest number of unique satDNA clusters and were clearly separated from other families, reflecting their phylogenetic divergence and distinct biogeographic history. We identified specific satDNAs conserved across all species, among them the PlSAT3-411, pointing to their important functional roles as pericentromeric satDNA.

conclusionThis study provides the first comprehensive comparative analysis of satDNA in freshwater crayfish. Our results highlight the dynamic nature of repetitive DNA and underscore its importance in genome organisation and evolutionary history.

Indexed as

Concerted evolutionDecapodaLibrary hypothesisRepetitive elementsSatellite DNA

Identifiers

PMID42050625
PMCPMC13130569

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.