Evidence map›Paper›PMID 42048187›Full record

ArticleSTAR protocols2026

Protocol for generating iPSC-derived intestinal organoids through dissection to model cystic fibrosis therapies.

Alexander J Stuffer, Barbara Tabak, Joshua Conte, Victoria Momyer, Mercy Chado, Matthew Armstrong, Phillip Wible, Andrey Sivachenko, Normand Allaire, Junjie Lu and 2 more

Abstract read
In one paragraph

Article in STAR protocols, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Alexander J StufferCystic Fibrosis Foundation Lab, 44 Hartwell Avenue, Lexington, MA 02421, USA.
Barbara TabakCystic Fibrosis Foundation Lab, 44 Hartwell Avenue, Lexington, MA 02421, USA.
Joshua ConteCystic Fibrosis Foundation Lab, 44 Hartwell Avenue, Lexington, MA 02421, USA.
Victoria MomyerCystic Fibrosis Foundation Lab, 44 Hartwell Avenue, Lexington, MA 02421, USA.
Mercy ChadoCystic Fibrosis Foundation Lab, 44 Hartwell Avenue, Lexington, MA 02421, USA.
Matthew ArmstrongCystic Fibrosis Foundation Lab, 44 Hartwell Avenue, Lexington, MA 02421, USA.
Phillip WibleCystic Fibrosis Foundation Lab, 44 Hartwell Avenue, Lexington, MA 02421, USA.
Andrey SivachenkoCystic Fibrosis Foundation Lab, 44 Hartwell Avenue, Lexington, MA 02421, USA.
Normand AllaireCystic Fibrosis Foundation Lab, 44 Hartwell Avenue, Lexington, MA 02421, USA.
Junjie LuCystic Fibrosis Foundation Lab, 44 Hartwell Avenue, Lexington, MA 02421, USA.
Martin MenseCystic Fibrosis Foundation Lab, 44 Hartwell Avenue, Lexington, MA 02421, USA.
John E MahoneyCystic Fibrosis Foundation Lab, 44 Hartwell Avenue, Lexington, MA 02421, USA. Electronic address: jmahoney@cff.org.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Intestinal organoids (IOs) are versatile, physiologically relevant models of the human gut. In cystic fibrosis research, IOs help evaluate CFTR correctors, potentiators, and translational readthrough compounds. Here, we present a protocol for generating induced pluripotent stem cell (iPSC)-derived IOs with high phenotypic similarity to primary material. We describe steps for establishing iPSC culture, generating intestinal progenitors via directed differentiation, and maturing these intestinal progenitors using three-dimensional culture. We then detail procedures for establishing intestinal organoid cultures from these progenitors using dissection-based techniques.

Indexed as

Cell Culture TechniquesCystic FibrosisInduced Pluripotent Stem CellsIntestinesOrganoidsCell DifferentiationDissectionHumansCell-based AssaysCell cultureCell DifferentiationOrganoids

Identifiers

PMID42048187
PMCPMC13138044

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.