Evidence map›Paper›PMID 42048159›Full record

ArticleAmerican journal of respiratory cell and molecular biology2026

Alveolar Type 2 Cell Dysfunction Is Associated with Bile Acid Alterations in Experimental Hepatopulmonary Syndrome.

Hyo-Jin Park, Hyung Joon Cho, Peng Chen, William P Pederson, Bin Liu, Dan Yi, Esther Juarez, Nickolaus Lorson, Amaya Bruner, Xiaomei Xia and 12 more

Abstract read
In one paragraph

Article in American journal of respiratory cell and molecular biology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors.

Hyo-Jin ParkDivision of Gastroenterology and Hepatology, Department of Internal Medicine, University of Arizona, College of Medicine-Phoenix, Phoenix, AZ, United States.
Hyung Joon ChoDivision of Gastroenterology and Hepatology, Department of Internal Medicine, University of Arizona, College of Medicine-Phoenix, Phoenix, AZ, United States.
Peng ChenDivision of Gastroenterology and Hepatology, Department of Internal Medicine, University of Arizona, College of Medicine-Phoenix, Phoenix, AZ, United States.
William P PedersonDepartment of Physiology, University of Arizona, Tucson, AZ, United States.
Bin LiuDivision of Pulmonary, Critical Care and Sleep, Department of Internal Medicine, University of Arizona, College of Medicine-Phoenix, Phoenix, AZ, United States.
Dan YiDivision of Pulmonary, Critical Care and Sleep, Department of Internal Medicine, University of Arizona, College of Medicine-Phoenix, Phoenix, AZ, United States.
Esther JuarezDivision of Gastroenterology and Hepatology, Department of Internal Medicine, University of Arizona, College of Medicine-Phoenix, Phoenix, AZ, United States.
Nickolaus LorsonDivision of Gastroenterology and Hepatology, Department of Internal Medicine, University of Arizona, College of Medicine-Phoenix, Phoenix, AZ, United States.
Amaya BrunerDivision of Gastroenterology and Hepatology, Department of Internal Medicine, University of Arizona, College of Medicine-Phoenix, Phoenix, AZ, United States.
Xiaomei XiaDivision of Pulmonary, Critical Care and Sleep, Department of Internal Medicine, University of Arizona, College of Medicine-Phoenix, Phoenix, AZ, United States.
Qi ZhengDivision of Pulmonary and Critical Care Medicine, Department of Medicine, Washington University in St. Louis, St. Louis, MO, United States.
Nabia Kheshtchin-KamelDivision of Gastroenterology and Hepatology, Department of Internal Medicine, University of Arizona, College of Medicine-Phoenix, Phoenix, AZ, United States.
Tara LiuDivision of Gastroenterology and Hepatology, Department of Internal Medicine, University of Arizona, College of Medicine-Phoenix, Phoenix, AZ, United States.
Sarah RaevensDepartment of Gastroenterology and Hepatology, Ghent University, Ghent, Belgium.
Michael F BeersDivision of Pulmonary, Allergy, and Critical Care Medicine, Department of Medicine, Penn-Children's Hospital of Lung Biology Institute, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, United States.
Feng LiDepartment of Pathology and Immunology, Baylor College of Medicine, Houston, TX, United States.
Ruud A W VeldhuizenDepartment of Physiology and Pharmacology, University of Western Ontario, Ontario, Canada.
Huiping ZhouDepartment of Microbiology and Immunology, Virginia Commonwealth University, Richmond, VA, United States.
Julie G LedfordDepartment of Cellular and Molecular Medicine, Asthma and Airway Disease Research Center, University of Arizona, Tucson, AZ, United States.
Steven M KawutDepartments of Medicine and Biostatistics, Epidemiology, and Informatics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, United States.
Zhiyu DaiDivision of Pulmonary, Critical Care and Sleep, Department of Internal Medicine, University of Arizona, College of Medicine-Phoenix, Phoenix, AZ, United States.
Michael B FallonDivision of Gastroenterology and Hepatology, Department of Internal Medicine, University of Arizona, College of Medicine-Phoenix, Phoenix, AZ, United States.

Funding

Alveolar Epithelial Cell Dysfunction in Pulmonary Fibrosis: Leveraging SFTPC Mutations for Discovery of Molecular and Cellular TargetsR01HL145408 · NHLBI · UNIVERSITY OF PENNSYLVANIA · PI MICHAEL FRANCIS BEERS · 2019 to 2026
$4.6M
Novel Mechanisms of Hepatopulmonary SyndromeR01HL142269 · NHLBI · UNIVERSITY OF PENNSYLVANIA · PI KAWUT, STEVEN M · 2018 to 2022
$3.9M
Novel alveolar mechanisms of hypoxemia in hepatopulmonary syndromeR01HL169509 · NHLBI · UNIVERSITY OF ARIZONA · PI Zhiyu Dai, MICHAEL B FALLON · 2023 to 2026
$3.0M
General Capillary to Arterial Endothelial Cell Transition in Pulmonary ArterialHypertensionR01HL170096 · NHLBI · WASHINGTON UNIVERSITY · PI Zhiyu Dai · 2023 to 2026
$2.9M
Role of Endothelial SOX17 Deficiency in the Pathogenesis of Pulmonary HypertensionR01HL158596 · NHLBI · WASHINGTON UNIVERSITY · PI Zhiyu Dai · 2022 to 2026
$2.3M
Fatty acid-binding proteins sustain endothelial glycolysis and arterial programming in pulmonary arterial hypertensionR01HL162794 · NHLBI · WASHINGTON UNIVERSITY · PI Zhiyu Dai · 2023 to 2026
$2.3M
BLRD VA I01 BX001176BLRD VA IK6 BX004477BLRD VA IS1 BX004777NHLBI NIH HHS R01 HL142269NHLBI NIH HHS R01 HL145408NHLBI NIH HHS R01 HL158596NHLBI NIH HHS R01 HL162794NHLBI NIH HHS R01 HL169509NHLBI NIH HHS R01 HL170096
6 · The paper itself

Abstract

Hepatopulmonary syndrome (HPS) is a severe complication of cirrhosis characterized by pulmonary microvascular dilation, hypoxemia, and increased mortality. Patients often exhibit unexplained restrictive ventilatory defects that correlate with circulating bile acids, suggesting superimposed alveolar dysfunction. To investigate this, we evaluated alveolar function, cell types, and the potential role of altered bile acids in the experimental HPS. Common bile duct ligation (CBDL) mice were assessed for pulmonary and surfactant function. AT2 cell-specific RiboTag RNA sequencing, single-cell RNA sequencing (scRNA-seq), and mass spectrometry-based bile acid profiling were performed. MLE12 cells were treated with bile acids in vitro, and an FXR agonist was administered in vivo to test effects on AT2 cell. CBDL mice developed HPS with restrictive defects due to reduced AT2 cell-derived surfactant-protein-C (SP-C), increased alveolar surface tension, and elevated plasma and bronchoalveolar bile acid levels. ScRNA-seq demonstrated a decrease in AT2 cells and an increase in AT2-to-AT1 transitional cells. AT2-specific RNA-seq revealed upregulated bile acid and cholesterol metabolism and downregulated proliferative pathways. In vitro, bile acids mimicking FXR antagonists reduced SP-C in MLE12 cells, while in vivo FXR agonist decreased circulating bile acids and restored SP-C-producing AT2 cells in CBDL mice. Our data demonstrates alterations in AT2 cell biology, including reduced surfactant expression, in the setting of elevated bile acids. These finding indicate an association between bile acid levels and AT2 cell alterations in cirrhosis and identify bile acid signaling and AT2 cell integrity as areas for future mechanistic investigation.

Indexed as

alveolar type 2 cellsbile acidscommon bile duct ligation mouse modelHepatopulmonary syndromepulmonary function tests

Identifiers

PMID42048159
PMCPMC13528454

What OpenQuestion holds

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.