Evidence map›Paper›PMID 42043206›Full record

ArticleViruses2026

Inter-Method Agreement of a Laboratory-Developed Qualitative CMV PCR Assay Across Multiple Non-Plasma Clinical Specimens.

Murat Aral, Ayfer Bakır, Cemal Çiçek, Elif Tuğçe Güner, Didem Özkan, Gülşah Ceylan Yağız, Mehmet Morkoç, Muhammed Furkan Kürkçü, Yusuf Üstün, Harun Erdal and 13 more

Abstract readComparative Study
In one paragraph

Article in Viruses, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors.

Murat AralDepartment of Medical Microbiology, Ankara Etlik City Hospital, Ankara 06170, Türkiye.
Ayfer BakırDepartment of Medical Microbiology, Ankara Etlik City Hospital, Ankara 06170, Türkiye.ORCID 0000-0002-9006-5267
Cemal ÇiçekDepartment of Medical Microbiology, Ankara Etlik City Hospital, Ankara 06170, Türkiye.
Elif Tuğçe GünerDepartment of Medical Microbiology, Ankara Etlik City Hospital, Ankara 06170, Türkiye.ORCID 0000-0002-8832-2201
Didem ÖzkanDepartment of Medical Microbiology, Ankara Etlik City Hospital, Ankara 06170, Türkiye.
Gülşah Ceylan YağızDepartment of Medical Microbiology, Ankara Etlik City Hospital, Ankara 06170, Türkiye.
Mehmet MorkoçDepartment of Medical Microbiology, Ankara Etlik City Hospital, Ankara 06170, Türkiye.
Muhammed Furkan KürkçüDepartment of Medical Microbiology, Ankara Etlik City Hospital, Ankara 06170, Türkiye.
Yusuf ÜstünDepartment of Gastroenterology, Ankara Etlik City Hospital, Ankara 06170, Türkiye.
Harun ErdalDepartment of Gastroenterology, Ankara Etlik City Hospital, Ankara 06170, Türkiye.
Şevki ÇelenDepartment of Perinatology, Ankara Etlik City Hospital, Ankara 06170, Türkiye.
Emine Bahar KurtDepartment of Chest Diseases, Ankara Etlik City Hospital, Ankara 06170, Türkiye.
Serap Akçalı DuruDepartment of Chest Diseases, Ankara Etlik City Hospital, Ankara 06170, Türkiye.
Asuman Nur KarhanDepartment of Pediatric Gastroenterology and Hepatology, Ankara Etlik City Hospital, Ankara 06170, Türkiye.
Ferda Özbay HoşnutDepartment of Pediatric Gastroenterology and Hepatology, Ankara Etlik City Hospital, Ankara 06170, Türkiye.
Ayşegül TokDepartment of Pediatric Gastroenterology and Hepatology, Ankara Etlik City Hospital, Ankara 06170, Türkiye.
Nilgün EroğluDepartment of Pediatric Hematology and Oncology, Ankara Etlik City Hospital, Ankara 06170, Türkiye.ORCID 0000-0002-9956-4054
Ferit KulalıDepartment of Neonatology, Ankara Etlik City Hospital, Ankara 06170, Türkiye.
Nurcan HanedanDepartment of Neonatology, Ankara Etlik City Hospital, Ankara 06170, Türkiye.
Yasemin ErolDepartment of Ophthalmology, Ankara Etlik City Hospital, Ankara 06170, Türkiye.
Ahmet Kürşad GüneşDepartment of Hematology, Ankara Etlik City Hospital, Ankara 06170, Türkiye.ORCID 0000-0001-5522-8342
Göknur Yapar TorosDepartment of Infectious Diseases, Ankara Etlik City Hospital, Ankara 06170, Türkiye.
Ebru OruçDepartment of Infectious Diseases, Ankara Etlik City Hospital, Ankara 06170, Türkiye.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThis study evaluated the inter-method agreement of an in-house qualitative CMV real-time PCR assay for the detection of cytomegalovirus (CMV) DNA in various non-plasma clinical specimen types, in comparison with a commercially available comparator assay.

methodsIn this prospective comparative study, 186 clinical specimens-including bronchoalveolar lavage fluid (BALF), stool, urine, colonoscopic biopsy, amniotic fluid, and intraocular fluid-were analyzed. A total of 166 samples with valid results from both test systems were included in the inter-method comparison. CMV DNA was detected using the in-house qualitative PCR assay in parallel with the comparator assay (artus

resultsSubstantial overall inter-method agreement was observed when all specimens were evaluated collectively (κ = 0.66). Agreement metrics were highest in stool, urine, and invasive specimens, whereas BALF samples demonstrated comparatively lower agreement, reflecting potential matrix-related analytical variability.

conclusionThe laboratory-developed qualitative CMV PCR assay demonstrated substantial inter-method agreement with the comparator assay across multiple non-plasma specimen types. The findings highlight specimen-specific variability in qualitative CMV DNA detection and represent analytical concordance between two molecular assays rather than definitive clinical diagnostic accuracy or viral load quantification.

Indexed as

CytomegalovirusCytomegalovirus InfectionsMolecular Diagnostic TechniquesReal-Time Polymerase Chain ReactionBronchoalveolar Lavage FluidDNA, ViralFecesHumansProspective StudiesSensitivity and SpecificityDNA, Viralcytomegalovirusinter-method agreementnon-plasma clinical samplesqualitative PCRreal-time PCR

Identifiers

PMID42043206
PMCPMC13120338

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.