Evidence map›Paper›PMID 42039613›Full record

ArticlebioRxiv : the preprint server for biology2026

The dynamics of nucleolus-centromeres interaction in living cells.

Wei-Hong Yeo, Emma Freeman, Alex B Willis, Hao F Zhang, Daniel Foltz, Sui Huang

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Wei-Hong YeoDepartment of Biomedical Engineering, Northwestern University, Evanston, IL, USA.ORCID 0000-0003-2181-1673
Emma FreemanDepartment of Cell and Developmental Biology, Northwestern University, Chicago, IL, USA.ORCID 0009-0005-4240-5238
Alex B WillisDepartment of Biochemistry and Molecular Genetics, Northwestern University, Chicago, IL, USA.
Hao F ZhangDepartment of Biomedical Engineering, Northwestern University, Evanston, IL, USA.ORCID 0000-0001-5089-1196
Daniel FoltzDepartment of Biochemistry and Molecular Genetics, Northwestern University, Chicago, IL, USA.ORCID 0000-0001-7423-6188
Sui HuangDepartment of Cell and Developmental Biology, Northwestern University, Chicago, IL, USA.ORCID 0000-0002-2400-4319

Funding

Technology Development UnitU54CA268084 · NCI · NORTHWESTERN UNIVERSITY · PI Daniela E Matei · 2022 to 2026
$10.0M
The role of the nucleolus in human genome organization in normal and disease statesU01CA260699 · NCI · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI FOLTZ, DANIEL RICHARD, HUANG, SUI · 2020 to 2024
$3.3M
Intrinsic-contrast super-resolution imaging of DNA at 2-nm resolutionR01GM139151 · NIGMS · NORTHWESTERN UNIVERSITY · PI ZHANG, HAO F · 2020 to 2023
$1.3M
Development of spectroscopic Single-Molecule Localization MicroscopyR01GM140478 · NIGMS · NORTHWESTERN UNIVERSITY · PI SUN, CHENG, ZHANG, HAO F · 2021 to 2024
$1.2M
NCI NIH HHS U01 CA260699NCI NIH HHS U54 CA268084NIGMS NIH HHS R01 GM139151NIGMS NIH HHS R01 GM140478
6 · The paper itself

Abstract

Nucleoli and centromeres play essential roles in cellular proliferation and homeostasis, and are structurally and functionally interconnected. Centromeres frequently cluster around nucleoli, and some centromere assembly factors are known to reside in the nucleoli. To investigate the spatial and temporal relationships between these nuclear domains, we examined their dynamics in living cells. We imaged HeLa cells stably expressing mCherry-NPM1 and GFP-CENP-A using time-lapse microscopy. The results show that a subset of centromeres exhibits dynamic behavior during interphase, migrating over micrometer-scale distances within two hours. On average, 40-50% of centromeres maintain an association with nucleoli throughout interphase, with some cells displaying nucleolar-centromere association and dissociation within hours. Upon entry into mitosis, nucleoli are disassembled, and NPM1 localizes to the periphery of mitotic chromosomes. Nucleolar-centromere interactions are re-established in early G1, coinciding with the assembly of new centromeres. Treatment with actinomycin D, an inhibitor of RNA polymerase I, significantly reduces nucleolar size, nucleolar-centromere interactions, and centromere dynamics. Furthermore, post-mitotic nucleolar reformation is impaired. These findings highlight the dynamic nature of centromeres in interphase nuclei and their interactions with nucleoli. This behavior is partially dependent on rDNA transcription and nucleolar integrity, underscoring the critical roles of nucleoli, centromeres, and their interaction in 4D genome organization.

Indexed as

4D dynamicscentromereslive cell imagingnucleoli

Identifiers

PMID42039613
PMCPMC13104842

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.