Evidence map›Paper›PMID 42039425›Full record

ArticlebioRxiv : the preprint server for biology2026

Structural basis of chaperone mechanisms in cells and the evolutionary emergence of the protein world.

Ahhyun Son, Catherine Durso, Timothy A Whitehead, Scott Horowitz

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Ahhyun SonDepartment of Chemistry & Biochemistry and the Knoebel Institute for Healthy Aging, University of Denver; Denver, CO 80208, USA.
Catherine DursoDaniel Felix Ritchie School of Engineering and Computer Science, University of Denver; Denver, CO 80208, USA.
Timothy A WhiteheadDepartment of Chemical and Biological Engineering, University of Colorado; Boulder, CO 80305, USA.
Scott HorowitzDepartment of Chemistry & Biochemistry and the Knoebel Institute for Healthy Aging, University of Denver; Denver, CO 80208, USA.

Funding

Nucleic Acids Roles in Protein Folding and AggregationR35GM142442 · NIGMS · UNIVERSITY OF DENVER (COLORADO SEMINARY) · PI Scott Andrew Horowitz · 2021 to 2026
$2.4M
Diagnostics on demand: a biosensor platform for multiplexed small molecule detectionR01GM151616 · NIGMS · UNIVERSITY OF CALIFORNIA RIVERSIDE · PI Sean Cutler · 2023 to 2026
$1.7M
NIGMS NIH HHS R01 GM151616NIGMS NIH HHS R35 GM142442
6 · The paper itself

Abstract

How chaperones mediate protein folding in the crowded cell environment remains poorly understood. To gain insight, we developed CHAP-SEQ to examine how chaperones affect protein folding in cells at high throughput and amino acid resolution. Performing CHAP-SEQ using three chaperone proteins and one chaperone RNA reveals distinct modes of folding assistance. Chaperone proteins act preferentially on hydrophobic core residues, whereas chaperone RNA primarily targets structural or dynamic signatures. Furthermore, while the chaperone RNA has little preference for clients' baseline foldability, the chaperone proteins favor clients with greater intrinsic foldability. These differences are consistent with an evolutionary hypothesis in which greater chaperone complexity played a role in the formation of stable hydrophobic cores, suggesting a potential link between chaperone function and the evolution of protein folding.

Identifiers

PMID42039425
PMCPMC13104955

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.