Evidence map›Paper›PMID 42038169›Full record

ArticleProceedings of SPIE--the International Society for Optical Engineering2025

Evaluating the robustness of features generated by a foundation model from CT with different reconstruction parameters.

Stephen Park, Anil Yadav, Hossein Tabatabaei, Yannan Lin, Denise R Aberle, Ashley E Prosper, William Hsu

Abstract read
In one paragraph

Article in Proceedings of SPIE--the International Society for Optical Engineering, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Stephen ParkDepartment of Bioengineering, Samueli School of Engineering, University of California, Los Angeles, CA USA 90095.
Anil YadavDepartment of Bioengineering, Samueli School of Engineering, University of California, Los Angeles, CA USA 90095.
Hossein TabatabaeiDepartment of Bioengineering, Samueli School of Engineering, University of California, Los Angeles, CA USA 90095.
Yannan LinDepartment of Bioengineering, Samueli School of Engineering, University of California, Los Angeles, CA USA 90095.
Denise R AberleDepartment of Bioengineering, Samueli School of Engineering, University of California, Los Angeles, CA USA 90095.
Ashley E ProsperDepartment of Radiological Sciences, David Geffen School of Medicine at UCLA, Los Angeles, CA USA 90095.
William HsuDepartment of Bioengineering, Samueli School of Engineering, University of California, Los Angeles, CA USA 90095.

Funding

EFIRM Liquid Biopsy Research Laboratory: Early Lung Cancer AssessmentU01CA233370 · NCI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI ABERLE, DENISE R., HSU, WILLIAM · 2018 to 2025
$8.0M
The Boston University - UCLA Lung Cancer Biomarker Characterization CenterU2CCA271898 · NCI · BOSTON UNIVERSITY MEDICAL CAMPUS · PI Jennifer Ellen Beane, Steven M. Dubinett · 2022 to 2026
$5.5M
Computational Toolkit for Normalizing the Impact of CT Acquisition and Reconstruction on Quantitative Image FeaturesR01EB031993 · NIBIB · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI HSU, WILLIAM, MCNITT-GRAY, MICHAEL F · 2022 to 2024
$2.1M
NCI NIH HHS U01 CA233370NCI NIH HHS U2C CA271898NIBIB NIH HHS R01 EB031993
6 · The paper itself

Abstract

Foundation models are increasingly recognized for their ability to extract robust imaging features by learning generalized representations from large datasets of unannotated images. Foundation models show promise in generating task-agnostic features that outperform conventional methods in diagnostic and prognostic tasks. However, the clinical application of imaging biomarkers is often hampered by their sensitivity to variations in image acquisition and reconstruction parameters. Hence, we evaluated the robustness of features extracted using the pretrained foundation model from low-dose computed tomography (LDCT) scans under varying image conditions. We analyzed 59 LDCT scans containing at least one nodule from individuals who underwent lung cancer screening. Each scan consisted of 6 variations of image conditions, including combinations of three reconstruction kernels (smooth, medium, sharp) and two slice thicknesses (1.0 mm, 2.0 mm). 56 nodules had nodule outcome labels (cancer vs. non-cancer) available, of which 7 had cancer outcomes. Features were extracted using the foundation model across all image conditions. The feature-level robustness was evaluated by computing the concordance correlation coefficient (CCC) between each feature value extracted from the reference condition (Medium/1.0) and the other 5 conditions. We also examined the impact of varying image conditions on the features' predictive ability in nodule outcome classification. Pyradiomics, a well-established radiomic feature extractor, served as a baseline for comparison. The foundation model consistently yielded high mean CCC values ranging from 0.937 (Smooth/2.0) to 0.984 (Sharp/1.0), indicating robustness against variations in image conditions. Moreover, the foundation model's features demonstrated high performance in nodule outcome classification compared to Pyradiomics features. However, inconsistencies in performance across different image conditions underscore the need for further exploration of harmonization techniques and modeling strategies to enhance the generalizability and clinical utility of imaging biomarkers.

Identifiers

PMID42038169
PMCPMC13105179

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.