Evidence map›Paper›PMID 42034617›Full record

ArticleScientific data2026

The near telomere-to-telomere genome assembly and annotation of the Asian house shrew (Suncus murinus, Soricidae, Eulipotyphla).

Xiongfei Zhang, Yingxu Wang, Jiayu Zhao, Guihua Zhang, Liyao Mai, Gang Li, Yandong Ren, Kai He

Abstract readDataset
In one paragraph

Article in Scientific data, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Xiongfei Zhang *South China Biodiversity Research Center, School of Life Science, Guangzhou University, Guangzhou, 510006, China.
Yingxu Wang *College of Life Science, Shaanxi Normal University, Xi'an, 710119, China.
Jiayu ZhaoCollege of Life Science, Shaanxi Normal University, Xi'an, 710119, China.
Guihua ZhangSouth China Biodiversity Research Center, School of Life Science, Guangzhou University, Guangzhou, 510006, China.
Liyao MaiSouth China Biodiversity Research Center, School of Life Science, Guangzhou University, Guangzhou, 510006, China. mailiyao@gzhu.edu.cn.
Gang LiCollege of Life Science, Shaanxi Normal University, Xi'an, 710119, China. gli@snnu.edu.cn.
Yandong RenCollege of Life Science, Shaanxi Normal University, Xi'an, 710119, China. renyandong90@126.com.
Kai HeSouth China Biodiversity Research Center, School of Life Science, Guangzhou University, Guangzhou, 510006, China. hekai@gzhu.edu.cn.

Funding

Basic and Applied Basic Research Foundation of Guangdong Province No. 2022B1515020033China Postdoctoral Science Foundation 2024M750613National Natural Science Foundation of China No. 32570535
6 · The paper itself

Abstract

The Asian house shrew (Suncus murinus), an insectivoran mammal of the family Soricidae, is potentially a good model species for studying ancestral mammalian traits and serves as an important model for biomedical research such as vomiting and diabetes. To establish a foundational genomic resource, we generated a high-quality, near telomere-to-telomere (near-T2T) genome assembly using a hybrid strategy integrating PacBio HiFi, Oxford Nanopore reads, and Hi-C technology. The final 2.77 Gb assembly is anchored onto 21 pseudo-chromosomes (19 autosomes and two sex chromosomes), exhibiting exceptional continuity with five chromosomes assembled into single, gapless contigs. Assembly and annotation completeness were supported by BUSCO scores of 95.7% (genome) and 93.5% (gene set; Laurasiatheria_odb10), and 22,719 protein-coding genes were annotated. We identified 412 expanded gene families in S. murinus, notably more than in other eulipotyphlans, enriched in immune resilience, metabolic optimization, and xenobiotic detoxification. These findings provide a genomic foundation for the species' unique physiological adaptations to high metabolic demands and diverse ecological niches. This high-quality resource offers a robust platform for advancing evolutionary genomics and biomedical research.

Indexed as

GenomeShrewsTelomereAnimalsMolecular Sequence Annotation

Identifiers

PMID42034617
PMCPMC13319441

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.