Evidence map›Paper›PMID 42030007›Full record

ArticleJournal of fluorescence2026

Computational design of 6-substituted phenalenone fluorophores: Impact of electron-donating groups.

Zelal Agin, Nuran Elmacı Irmak

Abstract read
In one paragraph

Article in Journal of fluorescence, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Zelal AginFaculty of Science, Department of Chemistry, Izmir Institute of Technology, Urla, Izmir, 35430, Turkey.
Nuran Elmacı IrmakFaculty of Science, Department of Chemistry, Izmir Institute of Technology, Urla, Izmir, 35430, Turkey. nuranelmaci@iyte.edu.tr.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Fluorophores and their properties can be modified by substituents based on the application area. Phenalenone is commonly used as a photosensitizer due to its high singlet oxygen quantum yield. Also, its derivatives are used in sensor implementations. This study focused on designing novel phenalenone-based fluorophores by introducing electron-donating substituents at the 6-position and evaluating the influence of a spacer group on their photophysical properties through quantum chemical calculations. DFT (density functional theory) and TD-DFT (time-dependent density functional theory) calculations were performed on 6-substituted phenalenone-based fluorophores to investigate their photophysical properties. Moderate rotational changes in some derivatives supported ICT (intramolecular charge transfer), while others exhibited smaller geometric changes but still showed donor-to-acceptor charge transfer. Introducing an amino (–NH₂) spacer induced pronounced geometric changes around the C–N single bond, consistent with the TICT (twisted intramolecular charge transfer) mechanism and indicative of potential fluorescence quenching pathways with large Stokes shifts. In contrast, derivatives with minimal rotational changes and no charge transfer character exhibited smaller Stokes shifts and a potential for fluorescence, demonstrating promise as phenalenone-based fluorophores suitable for sensor applications. The findings of this study have provided fundamental insights for future experimental studies into fluorophore design for optical sensing systems.

Indexed as

DFTFluorescent sensorsFluorophore designPhenalenoneTD-DFTTICT

Identifiers

PMID42030007
PMCPMC13226320

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.