Evidence map›Paper›PMID 42028257›Full record

ArticleBiophotonics discovery2025

Deployment of a real-time prostate cancer confirmation system with Raman spectroscopy: fine-tuning versus test-time adaptation of 1D CNNs.

David Grajales, William T Le, Victor Blanquez-Yeste, Frédérick Dallaire, Feryel Azzi, Guila Delouya, Dominique Trudel, Frédéric Leblond, Cynthia Ménard, Samuel Kadoury

Abstract read
In one paragraph

Article in Biophotonics discovery, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

David GrajalesPolytechnique Montréal, Montréal, Québec, Canada.ORCID https://orcid.org/0000-0002-0611-4549
William T LePolytechnique Montréal, Montréal, Québec, Canada.
Victor Blanquez-YestePolytechnique Montréal, Montréal, Québec, Canada.ORCID https://orcid.org/0009-0001-1551-7331
Frédérick DallairePolytechnique Montréal, Montréal, Québec, Canada.ORCID https://orcid.org/0000-0002-3333-9014
Feryel AzziCentre Hospitalier de l'Université de Montréa (CHUM), Montréal, Québec, Canada.
Guila DelouyaCentre Hospitalier de l'Université de Montréa (CHUM), Montréal, Québec, Canada.
Dominique TrudelCentre Hospitalier de l'Université de Montréa (CHUM), Montréal, Québec, Canada.ORCID https://orcid.org/0000-0001-9820-1772
Frédéric LeblondPolytechnique Montréal, Montréal, Québec, Canada.ORCID https://orcid.org/0000-0002-8154-4952
Cynthia MénardCentre Hospitalier de l'Université de Montréa (CHUM), Montréal, Québec, Canada.ORCID https://orcid.org/0000-0003-2609-9208
Samuel KadouryPolytechnique Montréal, Montréal, Québec, Canada.ORCID https://orcid.org/0000-0002-3048-4291

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Significance: Prostate cancer (PCa) confirmation during needle-based procedures is limited by the lack of intraoperative diagnostic tools. Raman spectroscopy (RS), combined with classification models, offers a promising solution for real-time tissue characterization, potentially improving sampling accuracy and therapy guidance. However, such models require tissue- and organ-specific data, making deployment in studies challenging due to limited data availability. Aim: The aim is to develop a one-dimensional convolutional neural network (1D-CNN) for real-time PCa detection using RS on prospectively collected Approach: A ResNet-based 1D-CNN was trained for binary cancer/normal tissue classification. We implemented a pre-training strategy using retrospective RS data from brain, breast, and prostate (202 patients), along with pre-trained bacterial models, followed by efficient fine-tuning and test-time adaptation (TTA) to adapt to unseen domains. Results: Prospective RS data were acquired using a robotic system from 10 PCa patients (two to five biopsies each). The fine-tuned model achieved 0.76 area under the receiver operating characteristic curve, 0.79 accuracy, 0.83 sensitivity, and 0.72 specificity, outperforming support vector machines. TTA improved predictions when labels were unavailable. Conclusions: Pre-trained 1D-CNNs combined with efficient fine-tuning or TTA enable accurate PCa detection in small-cohort settings using real-time RS.

Indexed as

convolutional neural networksprostate cancer analysisRaman spectroscopyrobotic guidancetest-time adaptation

Identifiers

PMID42028257
PMCPMC13052485

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.