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ArticleMolecular biology reports2026

Development of a high-copy target enhanced multiplexed crRNA-based, amplification-free detection assay (HiTECT) for Brucella spp.

Moon Moon Satpathy, Bablu Kumar, Prasad Thomas, Abhishek, Karam Pal Singh, O R Vinodhkumar

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Article in Molecular biology reports, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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5 · Who and what money

Authors and funding

6 authors.

Moon Moon SatpathyBiological Products Division, ICAR-IVRI, Izatnagar,Bareilly, India.
Bablu KumarBiological Products Division, ICAR-IVRI, Izatnagar,Bareilly, India. babbacteriol@gmail.com.
Prasad ThomasBacteriology & Mycology Division, ICAR-IVRI, Izatnagar,Bareilly, India.
AbhishekBacteriology & Mycology Division, ICAR-IVRI, Izatnagar,Bareilly, India.
Karam Pal SinghCADRAD, ICAR-IVRI, Izatnagar, Bareilly, India.
O R VinodhkumarVeterinary Epidemiology Division, ICAR-IVRI, Izatnagar,Bareilly, India.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundBrucellosis, a zoonotic disease caused by Brucella species, continues to pose major health challenges for humans and livestock, along with significant economic losses. Traditional serological tests are widely used but are limited, as they cannot reliably distinguish between active infection and past exposure. Molecular tools such as PCR and real-time PCR offer high sensitivity and specificity; however, their dependence on sophisticated equipment and trained personnel restricts their use outside well-equipped laboratories. More recently, isothermal techniques such as LAMP and RPA have emerged as faster, simpler alternatives, and their integration with CRISPR-based platforms has further enhanced detection capabilities. Nevertheless, these methods still face challenges, including the requirement for pre-amplification and the risk of contamination, which limit their practical application in field conditions. METHODS AND

resultsIn this study, we developed an amplification-free CRISPR-Cas12a assay—HiTECT (High-copy Target Enhanced CRISPR Test)—targeting the high-copy IS711 insertion element for thermocycler free rapid detection of Brucella spp. Using a multiplexed crRNA strategy, HiTECT enabled robust visual detection without nucleic acid amplification. Under optimal conditions (100 nM LbCas12a with a 1:1 Cas12a–crRNA ratio) and employing three crRNAs, fluorescence was significantly enhanced. The assay demonstrated an analytical sensitivity of 461.71 ag/µL of genomic DNA (0.92 fg/ reaction) and approximately 6*10⁴ CFU/mL for Brucella suis 1330. HiTECT was found very specific as it could detect all 16 field isolates and four reference Brucella strains, with no cross-reactivity to any of the non Brucella bacterial species, and showed substantial concordance with real-time PCR (κ = 0.65).

conclusionHiTECT provides a robust, amplification-free, field-deployable platform for rapid and sensitive detection of Brucella spp., offering clear advantages for resource-limited settings.

Indexed as

BrucellaBrucellosisMolecular Diagnostic TechniquesAnimalsCRISPR-Cas SystemsHumansNucleic Acid Amplification TechniquesRapid Diagnostic TestsSensitivity and SpecificityAmplification-free detectionBrucellosisCRISPR-Cas12aDiagnosticsIS711Point-of-care

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