Evidence map›Paper›PMID 42017753›Full record

ArticleJournal of microbiology & biology education2026

Using journal article annotations with Zotero to improve scientific literacy in course-based undergraduate research experiences.

Samuel H Neely, Héctor G Loyola Irizarry, Melissa McCartney, Jessica Siltberg-Liberles

Abstract read
In one paragraph

Article in Journal of microbiology & biology education, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Samuel H NeelyDepartment of Biological Sciences, Florida International University, Miami, Florida, USA.ORCID 0000-0001-6391-0990
Héctor G Loyola IrizarryDepartment of Biological Sciences, Florida International University, Miami, Florida, USA.ORCID 0000-0003-1131-2547
Melissa McCartneyDepartment of Pharmacology and Toxicology, University at Buffalo, Buffalo, New York, USA.ORCID 0000-0001-5857-5382
Jessica Siltberg-LiberlesDepartment of Biological Sciences, Florida International University, Miami, Florida, USA.ORCID 0000-0001-7927-2428

Funding

Investigating Career & Research Experience Access Through Evidence (iCREATE)R01GM147150 · NIGMS · FLORIDA INTERNATIONAL UNIVERSITY · PI Rocio Benabentos, Melissa R McCartney · 2022 to 2026
$2.0M
Engaging and Mentoring through Biomedical Research And Career Exploration (EMBRACE)R25AI170382 · NIAID · FLORIDA INTERNATIONAL UNIVERSITY · PI LIBERLES, JESSICA, MCCARTNEY, MELISSA R · 2023 to 2024
$669k
NIAID NIH HHS R25 AI170382NIGMS NIH HHS R01 GM147150
6 · The paper itself

Abstract

Journal Article Annotations with Zotero (JAAZ) is an activity designed to help undergraduate life science students develop essential skills for critically engaging with research articles while building proficiency in reference management. This structured, multi-part assignment introduces students to Zotero, a free reference manager, and guides them in actively engaging with scientific literature. Students use Zotero to read and annotate journal articles, which provides them with experience in evaluating scientific literature. Articles are first annotated independently with notes that define terminology, explain complex concepts, and identify the main points of the study. Then, in reading groups, students discuss the article and their independent annotations, working together to produce a consensus group-annotated version that is shared with the class. By making the annotation process a collaborative resource, JAAZ makes research articles more accessible, enabling students to engage with a greater number of articles in less time while improving overall comprehension. Students also build skills in critically evaluating whether an article is relevant and should be cited in their own research writing. We find that this activity helps undergraduate life science students enrolled in bioinformatics research courses become more confident in navigating scientific literature and managing references.

Indexed as

active learningbioinformaticscourse-based undergraduate research experiences (CUREs)reference managementresearch skills developmentSTEM education

Identifiers

PMID42017753
PMCPMC13520692

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.