Evidence map›Paper›PMID 42014803›Full record

ArticleNPJ precision oncology2026

Nanoplate based digital PCR assay for effective quantification of plasma HPV circulating tumor DNA.

Preetiparna Parida, Gayathri Baburaj, Ajay A Shettigar, Krishna Sharan, Mehta Vedant Kamal, Pranav P V, Jayashree N P, Naveena A N Kumar, Ganesh Mohan, Shamee Shastry and 3 more

Abstract read
In one paragraph

Article in NPJ precision oncology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Preetiparna ParidaDepartment of Medical Genetics, Kasturba Medical College, Manipal Academy of Higher Education, Manipal, India.
Gayathri BaburajDepartment of Pharmacy Practice, Center for Translational Research, Manipal College of Pharmaceutical Sciences, Manipal Academy of Higher Education, Manipal, India.
Ajay A ShettigarDepartment of Medical Genetics, Kasturba Medical College, Manipal Academy of Higher Education, Manipal, India.
Krishna SharanDepartment of Radiotherapy and Oncology, KS Hegde Medical Academy (KSHEMA), Nitte (Deemed to be University), Deralakatte, Mangaluru, India.
Mehta Vedant KamalDepartment of Surgical Oncology, Kasturba Medical College, Manipal Academy of Higher Education, Manipal, India.
Pranav P VDepartment of Radiation Oncology, Kasturba Medical College, Manipal Academy of Higher Education, Manipal, India.
Jayashree N PDepartment of Radiation Oncology, Kasturba Medical College, Manipal Academy of Higher Education, Manipal, India.
Naveena A N KumarDepartment of Surgical Oncology, Kasturba Medical College, Manipal Academy of Higher Education, Manipal, India.
Ganesh MohanDepartment of Immunohematology and Blood Transfusion, Kasturba Medical College, Manipal Academy of Higher Education, Manipal, India.
Shamee ShastryDepartment of Immunohematology and Blood Transfusion, Kasturba Medical College, Manipal Academy of Higher Education, Manipal, India.
Mahadev RaoDepartment of Pharmacy Practice, Center for Translational Research, Manipal College of Pharmaceutical Sciences, Manipal Academy of Higher Education, Manipal, India.
Shirley LewisDepartment of Radiation Oncology, Kasturba Medical College, Manipal Academy of Higher Education, Manipal, India. shirley.salins@manipal.edu.ORCID http://orcid.org/0000-0001-5306-1649
Rama Rao DamerlaDepartment of Medical Genetics, Kasturba Medical College, Manipal Academy of Higher Education, Manipal, India. rama.damerla@manipal.edu.ORCID http://orcid.org/0000-0001-6815-0097

Funding

Department of Biotechnology, Government of India, Ramalingaswami Fellowship BT/RLF/Re-entry/21/2018
6 · The paper itself

Abstract

High risk Human papillomavirus (hrHPV) is a leading cause of cervical cancer. Numerous studies have demonstrated the utility of plasma HPV circulating tumor DNA (ctDNA) for disease monitoring in cervical cancer, nevertheless with diverse accuracies. We investigated whether higher sample and reaction volumes using nanoplate based digital PCR (dPCR) system offered enhanced sensitivity and reproducibility, crucial for detecting low-copies of HPV ctDNA. A multiplex dPCR assay was optimized for detecting hrHPV16, 18, and 31 plasma ctDNA from pre-treatment and follow-up plasma samples of 87 cervical cancer patients using Qiagen QIAcuity One dPCR. The assay demonstrated 98% sensitivity and 100% specificity for detecting HPV ctDNA from pre-treatment plasma cell-free DNA (cfDNA). Persistence of HPV ctDNA during follow up associated with disease relapse, while clearance of HPV ctDNA was observed in patients without recurrence. Higher sample and dPCR reaction volumes increased the sensitivity of the test, while HPV ctDNA monitoring effectively reflected disease burden. Trial registration: Clinical Trials Registry of India (CTRI/2020/01/022862); registered on 20 January 2020.

Identifiers

PMID42014803
PMCPMC13284192

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.