Evidence map›Paper›PMID 42011908›Full record

ArticlePlant physiology2026

Isopentenyl diphosphate isomerase exerts limited control over terpenoid biosynthesis in two woody plant species.

Toni Krause, Kristina Kshatriya, Jia Zhang, Johann M Rohwer, Jonathan Gershenzon, Axel Schmidt

Abstract read
In one paragraph

Article in Plant physiology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

Who cites it

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4 · The record

Corrections and comments

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5 · Who and what money

Authors and funding

6 authors.

Toni KrauseDepartment of Biochemistry, Max-Planck-Institute for Chemical Ecology, Hans-Knoell-Str. 8, Jena 07745, Germany.ORCID 0000-0001-7796-5191
Kristina KshatriyaDepartment of Biochemistry, Max-Planck-Institute for Chemical Ecology, Hans-Knoell-Str. 8, Jena 07745, Germany.ORCID 0009-0006-4631-0399
Jia ZhangDepartment of Biochemistry, Max-Planck-Institute for Chemical Ecology, Hans-Knoell-Str. 8, Jena 07745, Germany.ORCID 0009-0009-8558-989X
Johann M RohwerLaboratory for Molecular Systems Biology, Department of Biochemistry, Stellenbosch University, Private Bag X1, Matieland, Stellenbosch 7602, South Africa.ORCID 0000-0001-6288-8904
Jonathan GershenzonDepartment of Biochemistry, Max-Planck-Institute for Chemical Ecology, Hans-Knoell-Str. 8, Jena 07745, Germany.ORCID 0000-0002-1812-1551
Axel SchmidtDepartment of Biochemistry, Max-Planck-Institute for Chemical Ecology, Hans-Knoell-Str. 8, Jena 07745, Germany.ORCID 0000-0002-4318-0799

Funding

International Leibniz Research School for Microbial and Biomolecular InteractionsMax Planck Society
6 · The paper itself

Abstract

Terpenoid biosynthesis involves linear prenyl diphosphate intermediates of various chain lengths. These are constructed from 2 C5 precursors, the starter unit dimethylallyl diphosphate (DMADP) and the extender unit, isopentenyl diphosphate (IDP). Isopentenyl diphosphate isomerase (IDI) alters the DMADP:IDP ratio and may furnish a specific blend of C5 precursors appropriate for the length of intermediates being formed in each cellular compartment. We studied IDI in two woody plant species, Norway spruce (Picea abies) and gray poplar (Populus × canescens), whose major terpenoid specialized metabolites are of different sizes. While the catalytic parameters of IDI from each species measured in vitro were in line with the different C5 precursor demands, the DMADP:IDP ratios of both species in vivo did not differ. Moreover, although IDI silencing in both spruce and poplar increased IDP content and significantly decreased the DMADP:IDP ratio, it caused a few significant alterations in the content of downstream terpenoid pathway intermediates or products. Taken together, these results suggest that IDI exercises a limited control over the relative amounts of different size terpenoid products. Nevertheless, the elevated IDP content of both transgenic spruce and poplar lines was associated with dramatically increased emission of isoprenol and isoprenyl acetate. Feeding experiments with cultured poplar plants indicated that these metabolites were derived directly from IDP, and their formation could serve as a metabolic mechanism to reduce high intracellular accumulation of IDP. Such a mechanism can be considered analogous to the formation of isoprene as a way to reduce high concentrations of DMADP.

Indexed as

Carbon-Carbon Double Bond IsomerasesPiceaPopulusTerpenesGene Expression Regulation, PlantGene SilencingHemiterpenesOrganophosphorus CompoundsPlant Proteins3,3-dimethylallyl pyrophosphateCarbon-Carbon Double Bond IsomerasesHemiterpenesisopentenyldiphosphate delta-isomeraseisopentenyl pyrophosphateOrganophosphorus CompoundsPlant ProteinsTerpenes

Identifiers

PMID42011908
PMCPMC13222028

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.