Evidence map›Paper›PMID 42010606›Full record

ArticleJournal of translational medicine2026

PTPRN2 hypomethylation and PHB2-associated miR-153-3p maturation define dual epigenetic features linked to symptom variability in Myalgic encephalomyelitis.

Lynda Chalder, Wesam Elremaly, Dawei Li, Yu Fang, Iurie Caraus, Corinne Leveau, Mohamed Elbakry, Anita Franco, Christian Godbout, Geneviève Di Tomasso and 5 more

Abstract read
In one paragraph

Article in Journal of translational medicine, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Lynda Chalder *Viscogliosi Laboratory in Molecular Genetics of Musculoskeletal Diseases, Office 2.17.027, Azrieli Research Center, CHU Sainte-Justine, 3175 Cote-Ste-Catherine Road, Montreal, QC, Canada.
Wesam Elremaly *Viscogliosi Laboratory in Molecular Genetics of Musculoskeletal Diseases, Office 2.17.027, Azrieli Research Center, CHU Sainte-Justine, 3175 Cote-Ste-Catherine Road, Montreal, QC, Canada.
Dawei LiOpen Medicine Foundation ME/CFS Collaborative Center at CHU Sainte- Justine, Université de Montréal, Montreal, QC, Canada.
Yu FangDepartment of Immunology & Molecular Microbiology, Texas Tech University Health Sciences Center, Lubbock, TX, USA.
Iurie CarausViscogliosi Laboratory in Molecular Genetics of Musculoskeletal Diseases, Office 2.17.027, Azrieli Research Center, CHU Sainte-Justine, 3175 Cote-Ste-Catherine Road, Montreal, QC, Canada.
Corinne LeveauViscogliosi Laboratory in Molecular Genetics of Musculoskeletal Diseases, Office 2.17.027, Azrieli Research Center, CHU Sainte-Justine, 3175 Cote-Ste-Catherine Road, Montreal, QC, Canada.
Mohamed ElbakryViscogliosi Laboratory in Molecular Genetics of Musculoskeletal Diseases, Office 2.17.027, Azrieli Research Center, CHU Sainte-Justine, 3175 Cote-Ste-Catherine Road, Montreal, QC, Canada.
Anita FrancoViscogliosi Laboratory in Molecular Genetics of Musculoskeletal Diseases, Office 2.17.027, Azrieli Research Center, CHU Sainte-Justine, 3175 Cote-Ste-Catherine Road, Montreal, QC, Canada.
Christian GodboutPatient-Partner, ICanCME Research Network, Azrieli Research Center, CHU Sainte-Justine, Montreal, QC, Canada.
Geneviève Di TomassoDepartment of Biochemistry and Molecular Medicine, Faculty of Medicine, Université de Montréal, Montreal, QC, Canada.
Evguenia NepotchatykhViscogliosi Laboratory in Molecular Genetics of Musculoskeletal Diseases, Office 2.17.027, Azrieli Research Center, CHU Sainte-Justine, 3175 Cote-Ste-Catherine Road, Montreal, QC, Canada.
Bita Rostami-AfshariViscogliosi Laboratory in Molecular Genetics of Musculoskeletal Diseases, Office 2.17.027, Azrieli Research Center, CHU Sainte-Justine, 3175 Cote-Ste-Catherine Road, Montreal, QC, Canada.
Michael GimenezViscogliosi Laboratory in Molecular Genetics of Musculoskeletal Diseases, Office 2.17.027, Azrieli Research Center, CHU Sainte-Justine, 3175 Cote-Ste-Catherine Road, Montreal, QC, Canada.
Pascale LegaultDepartment of Biochemistry and Molecular Medicine, Faculty of Medicine, Université de Montréal, Montreal, QC, Canada.
Alain MoreauViscogliosi Laboratory in Molecular Genetics of Musculoskeletal Diseases, Office 2.17.027, Azrieli Research Center, CHU Sainte-Justine, 3175 Cote-Ste-Catherine Road, Montreal, QC, Canada. alain.moreau.hsj@ssss.gouv.qc.ca.ORCID 0009-0002-1144-6174

Funding

Bristol-Myers-Squibb Chair in Molecular Biology at the Université de Montréal Bristol-Myers-Squibb Chair in Molecular Biology at the Université de MontréalCIHR PJT 186036Laparé and Legault Funds in Biochemistry for Research in RNA Biology and Neurodegenerative Diseases Laparé and Legault Funds in Biochemistry for Research in RNA Biology and Neurodegenerative DiseasesParkinson Canada Parkinson CanadaSibylla-Hesse Foundation Sibylla-Hesse FoundationThe Open Medicine Foundation Canada The Open Medicine Foundation Canada
6 · The paper itself

Abstract

backgroundMyalgic encephalomyelitis (ME) is a chronic, debilitating condition increasingly linked to epigenetic changes. With its unclear pathophysiology and no validated diagnostic biomarkers, DNA methylation becomes of interest. Specifically, DNA methylation patterns in saliva, to study ME-related epigenetic changes.

methodsSaliva samples from 54 ME patients and 21 sedentary healthy controls were analyzed by DNA methylation array. Symptom assessment was conducted using validated questionnaires (SF-36, MFI-20, and DSQ).

resultsA significant DNA hypomethylation at the CpG site cg19803194 (Bonferroni-corrected and adjusted for saliva composition, p = 2.14 × 10− 7) within the PTPRN2 gene body was identified. This hypomethylation was associated with cognitive impairments in both sexes, such as difficulties expressing thoughts and comprehension, commonly known as “brain fog,” and respiratory symptoms in male patients. The hypomethylation also corresponded with reduced circulating levels of miR-153-3p, an intronic microRNA of PTPRN2, which was associated with impaired memory recall in both sexes. Interestingly, the mitochondrial protein Prohibitin 2 (PHB2) was associated with reduced miR-153-3p activity. This association was consistent with a predominant cytoplasmic localization of PHB2 and selective reduction of mature miR-153-3p without changes in its immature forms, suggesting involvement at a post-transcriptional stage that may be attenuated in female patients due to increased extracellular export of PHB2.

conclusionsThese findings suggest a potential epigenetic relationship in ME involving PTPRN2 body hypomethylation and PHB2-associated variation in miR-153-3p levels. While the directionality between gene-body methylation and expression remains a biological hypothesis, these results shed light on potential molecular pathways associated with symptom variability and sex differences in ME severity.

Indexed as

DNA MethylationEpigenesis, GeneticFatigue Syndrome, ChronicMicroRNAsReceptor-Like Protein Tyrosine Phosphatases, Class 8Repressor ProteinsAdultCase-Control StudiesCpG IslandsFemaleHumansMaleMiddle AgedProhibitinsSalivaMicroRNAsPHB2 protein, humanProhibitinsReceptor-Like Protein Tyrosine Phosphatases, Class 8Repressor ProteinsCognitionDNA methylationEpigeneticsmiR-153-3pMyalgic encephalomyelitisPHB2PTPRN2Symptoms

Identifiers

PMID42010606
PMCPMC13251012

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.