Evidence map›Paper›PMID 42008293›Full record

ArticleThe Journal of experimental medicine2026

Alternatively activated monocyte-derived myeloid cells promote extracellular pathogen persistence in pulmonary fungal granulomas.

Yufan Zheng, Makheni Jean Pierre, Eduard Ansaldo, Hannah E Dobson, Olena Kamenyeva, Chinaemerem U Onyishi, Sarah Douglas, Christopher Febres Aldana, Pinar Engin Zerk, Irini Sereti and 4 more

Abstract read
In one paragraph

Article in The Journal of experimental medicine, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

14 authors.

Yufan Zheng *Molecular Mycology and Immunity Section, Laboratory of Host Immunity and Microbiome, National Institute of Allergy and Infectious Diseases, National Institutes of Health , Bethesda, MD, USA.ORCID 0000-0002-4827-6191
Makheni Jean Pierre *Molecular Mycology and Immunity Section, Laboratory of Host Immunity and Microbiome, National Institute of Allergy and Infectious Diseases, National Institutes of Health , Bethesda, MD, USA.ORCID 0000-0001-7981-6050
Eduard AnsaldoMolecular Mycology and Immunity Section, Laboratory of Host Immunity and Microbiome, National Institute of Allergy and Infectious Diseases, National Institutes of Health , Bethesda, MD, USA.ORCID 0000-0002-7128-3373
Hannah E DobsonMolecular Mycology and Immunity Section, Laboratory of Host Immunity and Microbiome, National Institute of Allergy and Infectious Diseases, National Institutes of Health , Bethesda, MD, USA.ORCID 0000-0003-1246-880X
Olena KamenyevaResearch Technology Branch, Biological Imaging Section, National Institute of Allergy and Infectious Diseases, National Institutes of Health , Bethesda, MD, USA.ORCID 0000-0002-6541-5616
Chinaemerem U OnyishiMolecular Mycology and Immunity Section, Laboratory of Host Immunity and Microbiome, National Institute of Allergy and Infectious Diseases, National Institutes of Health , Bethesda, MD, USA.ORCID 0000-0001-8292-9873
Sarah DouglasLaboratory of Parasitic Diseases, National Institute of Allergy and Infectious Diseases, National Institutes of Health , Bethesda, MD, USA.ORCID 0009-0002-2236-6962
Christopher Febres AldanaLaboratory of Pathology, Center for Cancer Research, National Cancer Institute, National Institutes of Health , Bethesda, MD, USA.ORCID 0000-0002-4754-1344
Pinar Engin ZerkLaboratory of Pathology, Center for Cancer Research, National Cancer Institute, National Institutes of Health , Bethesda, MD, USA.ORCID 0000-0002-4292-6392
Irini SeretiHIV Pathogenesis Section, Laboratory of Immunoregulation, National Institute of Allergy and Infectious Diseases, National Institutes of Health , Bethesda, MD, USA.ORCID 0000-0002-0076-0224
Jovany J BetancourtDepartment of Biomedical Sciences and Pathobiology, Virginia Tech, Blacksburg, VA, USA.ORCID 0000-0003-0364-4816
Kirsten NielsenDepartment of Biomedical Sciences and Pathobiology, Virginia Tech, Blacksburg, VA, USA.ORCID 0000-0002-2318-168X
Erin McCafferyLaboratory of Parasitic Diseases, National Institute of Allergy and Infectious Diseases, National Institutes of Health , Bethesda, MD, USA.ORCID 0000-0001-7241-1798
Eric V DangMolecular Mycology and Immunity Section, Laboratory of Host Immunity and Microbiome, National Institute of Allergy and Infectious Diseases, National Institutes of Health , Bethesda, MD, USA.ORCID 0000-0002-2389-6167

Funding

Investigating mammalian innate immune responses to pathogenic fungiZIAAI001364 · NIAID · NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES · PI DANG, ERIC · 2023 to 2025
$4.1M
Continuum of Immune Responses to Cryptococcus neoformansR01AI176922 · NIAID · VIRGINIA POLYTECHNIC INST AND ST UNIV · PI Kirsten Nielsen · 2023 to 2026
$3.0M
Spatially mapping and modeling tuberculosis granulomas to define the immunological determinants of infection outcomeZIAAI001388 · NIAID · NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES · PI MCCAFFREY, ERIN · 2024 to 2025
$1.2M
Assessing the role of SP140 in enhanced resistance to Cryptococcus neoformansF31AI181528 · NIAID · UNIVERSITY OF MINNESOTA · PI Jovany Jordan Betancourt · 2024 to 2026
$145k
Intramural NIH HHS ZIA AI001364Intramural NIH HHS ZIA AI001388National Institute of Allergy and Infectious Diseases 1ZIAAI001388-01National Institute of Allergy and Infectious Diseases ZIA-AI001364NIAID NIH HHS F31 AI181528NIAID NIH HHS R01 AI176922NIH HHS F31AI181528NIH HHS R01AI176922
6 · The paper itself

Abstract

Inhaled fungal pathogens often generate granuloma-contained latent infections that can reactivate to cause invasive disease. However, why protective pathways fail to achieve sterilizing immunity in this setting is unclear. Here, we identify type 2 inflammation as a major arm of immunosuppression during latent, granulomatous fungal infection. Using reporter mice, we found that TH2 cells were the dominant source of type 2 cytokines and deletion of IL-4/IL-13, Stat6, or TH2 cells drove fungal clearance. Type 2 signaling acted on monocyte-derived myeloid cells that formed an ARG1+ ring around the granuloma core. STAT6 was required cell intrinsically in this compartment, and its loss reduced lung burden. Contrary to an intracellular-niche model, we found that Cryptococcus was predominantly extracellular in vivo. STAT6 deficiency did not enhance macrophage intracellular killing, but instead antagonized IFNγ-dependent protection against extracellular yeast. These findings identify a spatially organized TH2-STAT6 checkpoint that limits IFNγ-mediated extracellular killing and maintains cryptococcal latency.

Indexed as

CryptococcosisGranulomaLung Diseases, FungalMonocytesMyeloid CellsAnimalsCryptococcusCryptococcus neoformansInterferon-gammaInterleukin-13Interleukin-4LungMiceMice, Inbred C57BLMice, KnockoutSTAT6 Transcription FactorInterferon-gammaInterleukin-13Interleukin-4Stat6 protein, mouseSTAT6 Transcription Factor

Identifiers

PMID42008293
PMCPMC13154407

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.