Evidence map›Paper›PMID 42004723›Full record

ArticlePeerJ2026

Identification of colorectal cancer immune biomarkers

Genyuan Pu, Zi Yin, Xin Zhang, Zhiqi Liu, Caiting Yang, Chunping Xu, Mingming Lai

Abstract read
In one paragraph

Article in PeerJ, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Genyuan Pu *School of Basic Medicine, Dali University, Dali, China.
Zi Yin *School of Basic Medicine, Dali University, Dali, China.
Xin ZhangSchool of Basic Medicine, Dali University, Dali, China.
Zhiqi LiuSchool of Basic Medicine, Dali University, Dali, China.
Caiting YangSchool of Basic Medicine, Dali University, Dali, China.
Chunping XuSchool of Basic Medicine, Dali University, Dali, China.
Mingming LaiSchool of Basic Medicine, Dali University, Dali, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Colorectal cancer (CRC) remains a leading cause of cancer-related mortality worldwide. The identification of effective molecular targets is crucial for advancing precision medicine and prognostic strategies. This study aims to uncover key CRC biomarkers through integrative bioinformatics analyses, providing mechanistic insights for therapeutic development. Methods: We analyzed three CRC datasets from the Gene Expression Omnibus (GEO) database. Expression quantitative trait loci (eQTL) analysis was performed to identify instrumental variables (IVs), which were subsequently used in Mendelian Randomization (MR) analysis with CRC Genome-Wide Association Study (GWAS) data. MR-associated genes were intersected with differentially expressed genes (DEGs) to screen disease-related key genes. Functional enrichment analyses were conducted using Gene Ontology (GO), Kyoto Encyclopedia of Genes and Genomes (KEGG), and Gene Set Enrichment Analysis (GSEA). Additionally, immune cell infiltration and gene-immune correlation analyses were performed. Finally, validation was performed using independent GEO, The Cancer Genome Atlas (TCGA) datasets, summary data-based Mendelian randomization (SMR) and quantitative reverse transcription polymerase chain reaction (qRT-PCR) in CRC cell lines. Results: A total of 776 upregulated and 981 downregulated DEGs were identified. Nine key genes were prioritized: Discussion: This study suggests that

Indexed as

Biomarkers, TumorColorectal NeoplasmsQuantitative Trait LociCell Line, TumorGene Expression ProfilingGene Expression Regulation, NeoplasticGenome-Wide Association StudyHumansMendelian Randomization AnalysisTranscriptomeBiomarkers, TumorBioinformatics analysisColorectal cancerImmune cell infiltrationMolecular biomarkersTargeted therapy and immunotherapy

Identifiers

PMID42004723
PMCPMC13089222

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.