Evidence map›Paper›PMID 42001597›Full record

ArticleCancer research communications2026

Serial Plasma Comprehensive Genomic Profiling Captures Therapy Resistance and Guides Management of Non-Small Cell Lung Cancer.

Michael Conroy, Jaime Wehr, Vivian V Altiery De Jesus, Archana Balan, William Bowers, Jennifer W Li, Susan C Scott, Benjamin Levy, Kristen A Marrone, Vincent K Lam and 8 more

Abstract read
In one paragraph

Article in Cancer research communications, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors.

Michael ConroySidney Kimmel Comprehensive Cancer Center , Johns Hopkins University School of Medicine, Baltimore, Maryland.ORCID 0000-0001-9048-5213
Jaime WehrSidney Kimmel Comprehensive Cancer Center , Johns Hopkins University School of Medicine, Baltimore, Maryland.ORCID 0009-0005-3250-5710
Vivian V Altiery De JesusSidney Kimmel Comprehensive Cancer Center , Johns Hopkins University School of Medicine, Baltimore, Maryland.ORCID 0000-0001-8068-2416
Archana BalanSidney Kimmel Comprehensive Cancer Center , Johns Hopkins University School of Medicine, Baltimore, Maryland.ORCID 0000-0003-1283-577X
William BowersSidney Kimmel Comprehensive Cancer Center , Johns Hopkins University School of Medicine, Baltimore, Maryland.ORCID 0009-0007-6673-0021
Jennifer W LiSidney Kimmel Comprehensive Cancer Center , Johns Hopkins University School of Medicine, Baltimore, Maryland.ORCID 0000-0002-0981-2334
Susan C ScottSidney Kimmel Comprehensive Cancer Center , Johns Hopkins University School of Medicine, Baltimore, Maryland.ORCID 0000-0002-1797-1685
Benjamin LevySidney Kimmel Comprehensive Cancer Center , Johns Hopkins University School of Medicine, Baltimore, Maryland.ORCID 0009-0005-2331-8542
Kristen A MarroneSidney Kimmel Comprehensive Cancer Center , Johns Hopkins University School of Medicine, Baltimore, Maryland.ORCID 0000-0001-5319-824X
Vincent K LamSidney Kimmel Comprehensive Cancer Center , Johns Hopkins University School of Medicine, Baltimore, Maryland.ORCID 0000-0002-1319-2588
Josephine FelicianoSidney Kimmel Comprehensive Cancer Center , Johns Hopkins University School of Medicine, Baltimore, Maryland.ORCID 0009-0008-8163-2304
Christine L HannSidney Kimmel Comprehensive Cancer Center , Johns Hopkins University School of Medicine, Baltimore, Maryland.ORCID 0000-0002-1467-5557
Aliyah PabaniSidney Kimmel Comprehensive Cancer Center , Johns Hopkins University School of Medicine, Baltimore, Maryland.ORCID 0009-0006-7605-8497
Jarushka NaidooBeaumont RCSI Cancer Centre, Dublin, Ireland.ORCID 0000-0002-3470-8686
Julie R BrahmerSidney Kimmel Comprehensive Cancer Center , Johns Hopkins University School of Medicine, Baltimore, Maryland.ORCID 0000-0002-2443-8395
Patrick M FordeSidney Kimmel Comprehensive Cancer Center , Johns Hopkins University School of Medicine, Baltimore, Maryland.ORCID 0000-0001-6925-6344
Valsamo AnagnostouSidney Kimmel Comprehensive Cancer Center , Johns Hopkins University School of Medicine, Baltimore, Maryland.ORCID 0000-0001-9480-3047
Joseph C MurraySidney Kimmel Comprehensive Cancer Center , Johns Hopkins University School of Medicine, Baltimore, Maryland.ORCID 0000-0001-6159-7814

Funding

Bloomberg∼Kimmel Institute for Cancer Immunotherapy, Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University (Bloomberg∼Kimmel Institute for Cancer Immunotherapy)Maryland Cigarette Restitution FundNational Cancer Institute (NCI) CA121113National Cancer Institute (NCI) UG1CA233259
6 · The paper itself

Abstract

Plasma comprehensive genomic profiling (pCGP) is implemented in the clinical care of non-small cell lung cancer (NSCLC). Although less well documented, serial pCGP may also guide the management of oncogene-driven NSCLC after first progression. In this study, we assessed the clinical value of serial pCGP, focusing on EGFR-mutant NSCLC. We conducted a retrospective study of 718 patients with NSCLC who underwent pCGP between 2015 and 2022. Clinical genomic data were programmatically extracted from the data workflows of the Johns Hopkins Lung Cancer Precision Medicine Center of Excellence. After variant annotation and actionability characterization, we examined the prevalence and evolving comutation patterns across serial pCGP, focusing on genomic mechanisms of tyrosine kinase inhibitor (TKI)-acquired resistance in EGFR-mutant NSCLC. A total of 718 patients had 818 instances of pCGP, with 79 patients having longitudinal pCGP (range, 2-5). pCGP uniquely informed management in 13% of patients (n = 92), both at initial diagnosis and on serial genotyping. This occurred predominantly through the identification of actionable mutations when tissue testing was unavailable. Among 214 patients with EGFR-mutant NSCLC, pCGP identified PI3K pathway alterations in 11% after first-line therapy. BRAF V600E (3%) and MET exon 14 skipping mutations (3%) emerged after third-generation TKI therapy. After TKI progression, 31 patients (22%) with EGFR-mutant disease had actionable pCGP findings, of whom 18 (58%) were matched to targeted therapy. Serial pCGP can inform treatment decisions in patients with NSCLC. In those with EGFR-mutant disease, pCGP at progression identifies actionable drivers of therapy resistance, enabling therapeutic intervention. SIGNIFICANCE: Our study provides critical insights into the routine implementation of serial pCGP within a thoracic oncology program, supported by a precision oncology informatics framework, in a tertiary healthcare institution. We show that pCGP enables genotyping when tissue testing is not feasible and identifies actionable mutations at resistance. The clinical implementation of pCGP can drive improved clinical outcomes by matching patients with effective interventions in a timely and minimally invasive manner.

Indexed as

Carcinoma, Non-Small-Cell LungDrug Resistance, NeoplasmLung NeoplasmsAdultAgedAged, 80 and overBiomarkers, TumorErbB ReceptorsFemaleGene Expression ProfilingGenomicsHumansMaleMiddle AgedMutationProtein Kinase InhibitorsBiomarkers, TumorEGFR protein, humanErbB ReceptorsProtein Kinase Inhibitors

Identifiers

PMID42001597
PMCPMC13192330

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.