Evidence map›Paper›PMID 41994199›Full record

ArticleTransactions on machine learning research2025

Multi-Modal Foundation Models for Computational Pathology: A Survey.

Dong Li, Guihong Wan, Xintao Wu, Xinyu Wu, Xiaohui Chen, Yi He, Zhong Chen, Peter K Sorger, Chen Zhao

Abstract read
In one paragraph

Article in Transactions on machine learning research, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
  4. Review
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Dong LiDepartment of Computer Science, Baylor University.
Guihong WanDepartment of Dermatology, Massachusetts General Hospital, Harvard Medical School.
Xintao WuElectrical Engineering and Computer Science Department, University of Arkansas.
Xinyu WuDepartment of Computer Science, Baylor University.
Xiaohui ChenDepartment of Computer Science, Baylor University.
Yi HeDepartment of Data Science, The College of William and Mary.
Zhong ChenSchool of Computing, Southern Illinois University.
Peter K SorgerDepartment of Systems Biology, Harvard Medical School.
Chen ZhaoDepartment of Computer Science, Baylor University.

Funding

Explainable Artificial Intelligence for Melanoma Recurrence Prediction via Integrative Modeling of Multiplexed Imaging with Transcriptomics and HistopathologyK99CA286966 · NCI · MASSACHUSETTS GENERAL HOSPITAL · PI WAN, GUIHONG · 2024 to 2025
$352k
NCI NIH HHS K99 CA286966
6 · The paper itself

Abstract

Foundation models have emerged as a powerful paradigm in computational pathology (CPath), enabling scalable and generalizable analysis of histopathological images. While early developments centered on uni-modal models trained solely on visual data, recent advances have highlighted the promise of multi-modal foundation models that integrate heterogeneous data sources such as textual reports, structured domain knowledge, and molecular profiles. In this survey, we provide a comprehensive and up-to-date review of multi-modal foundation models in CPath, with a particular focus on models built upon hematoxylin and eosin (H&E) stained whole slide images (WSIs) and tile-level representations. We categorize 34 state-of-the-art multi-modal foundation models into three major paradigms: vision-language, vision-knowledge graph, and vision-gene expression. We further divide vision-language models into non-LLM-based and LLM-based approaches. Additionally, we analyze 30 available multi-modal datasets tailored for pathology, grouped into image-text pairs, instruction datasets, and image-other modality pairs. Our survey also presents a taxonomy of downstream tasks, highlights training and evaluation strategies, and identifies key challenges and future directions. We aim for this survey to serve as a valuable resource for researchers and practitioners working at the intersection of pathology and AI.

Identifiers

PMID41994199
PMCPMC13081565

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.