Evidence map›Paper›PMID 41993492›Full record

ArticlebioRxiv : the preprint server for biology2026

The Rayleigh Quotient and Contrastive Principal Component Analysis II.

Kayla Jackson, Maria Carilli, Lior Pachter

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Kayla JacksonDivision of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA, USA.ORCID 0000-0001-6483-0108
Maria CarilliDivision of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA, USA.ORCID 0000-0002-8977-7224
Lior PachterDivision of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA, USA.ORCID 0000-0002-9164-6231

Funding

A spatial view of hematopoietic regeneration dynamics in the bone marrowR01DK143671 · NIDDK · UNIVERSITY OF SOUTHERN CALIFORNIA · PI MICHAEL B ELOWITZ, Rong Lu · 2024 to 2026
$8.1M
NIDDK NIH HHS R01 DK143671
6 · The paper itself

Abstract

Contrastive principal component analysis (PCA) methods are effective approaches to dimensionality reduction where variance of a target dataset is maximized while variance of a background dataset is minimized. We previously described how contrastive PCA problems can be written as solutions to generalized eigenvalue problems that maximize particular instantiations of the Rayleigh quotient. Here, we discuss two extensions of contrastive PCA: we use kernel weighting from spatial PCA (k-

Identifiers

PMID41993492
PMCPMC13081959

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.