Evidence map›Paper›PMID 41986875›Full record

ArticleGenetics2026

Calibrating and documenting host-switching and evolution of incompatibility loci for two closely related Wolbachia clades.

J Dylan Shropshire, William R Conner, Dan Vanderpool, Ary A Hoffmann, Michael Turelli, Brandon S Cooper

Abstract read
In one paragraph

Article in Genetics, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Pervasive effects ofbioRxiv : the preprint server for biology · 2026
    Article
  2. Article
  3. Article
  4. Article
  5. bioRxiv : the preprint server for biology · 2026
    Article
  6. Climate predictsbioRxiv : the preprint server for biology · 2026
    Article
  7. Temperature-sensitive cytoplasmic incompatibility across divergentbioRxiv : the preprint server for biology · 2026
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors.

J Dylan ShropshireDivision of Biological Sciences, University of Montana, Missoula, MT 59812, United States.ORCID 0000-0003-4221-2178
William R ConnerDivision of Biological Sciences, University of Montana, Missoula, MT 59812, United States.ORCID 0000-0001-9407-6038
Dan VanderpoolForest Service, National Genomics Center for Wildlife and Fish Conservation, Missoula, MT 59801, United States.ORCID 0000-0002-6856-5636
Ary A HoffmannPest and Environmental Adaptation Research Group, School of BioSciences, Bio21 Institute, University of Melbourne, Parkville, Victoria 3010, Australia.ORCID 0000-0001-9497-7645
Michael TurelliDepartment of Evolution and Ecology, University of California, Davis, CA 95616, United States.ORCID 0000-0003-1188-9856
Brandon S CooperDivision of Biological Sciences, University of Montana, Missoula, MT 59812, United States.ORCID 0000-0002-8269-7731

Funding

Research Core (Developmental Research Project Program)P20GM103474 · NIGMS · MONTANA STATE UNIVERSITY - BOZEMAN · PI Jeffrey Good · 2012 to 2026
$60.0M
The evolutionary genetics and genomics of Wolbachia effects on host physiologyR35GM124701 · NIGMS · UNIVERSITY OF MONTANA · PI Brandon S. Cooper · 2017 to 2026
$3.9M
Lehigh UniversityM. J. Murdock Charitable Trust 202324717Montana INBRE Data Science CoreNational Institutes of Health (NIH) MIRA R35GM124701National Science Foundation (NSF) CAREER 2145195NIGMS NIH HHS P20 GM103474NIGMS NIH HHS P20GM103474NIGMS NIH HHS R35 GM124701NIHNSFNSF Postdoctoral Research Fellowship in Biology DBI-2010210Office of the Vice President for Research and Creative ScholarshipUMGCUniversity of MontanaUniversity of Montana Genomics Core (UMGC)
6 · The paper itself

Abstract

Maternally inherited Wolbachia alphaproteobacteria are the most common arthropod endosymbionts. Often, Wolbachia spread to high frequencies through cytoplasmic incompatibility, in which cif loci act through sperm to kill embryos lacking Wolbachia. Closely related Wolbachia with diverse cif loci often associate with anciently diverged hosts, but the timescale of associations remains uncertain. We produce new calibrations based on filarial nematodes with vertically inherited Wolbachia that codiverge with their hosts. Applying these calibrations to Wolbachia variants closely related to pathogen-blocking wMel from Drosophila melanogaster, we demonstrate that over a timescale of 1 to 2 million years, a core set of single-copy Wolbachia loci evolve largely through bifurcation rather than by gene exchange with distant Wolbachia. Dating bifurcating core genomes, we show that "wMel-like" Wolbachia diverged 2.1 × 105 to 2.4 × 106 years inhabit dipteran and hymenopteran hosts diverged more than 108 years. Previous published analysis of variants related to wRi from Drosophila simulans, the first Wolbachia found in a drosophilid, concluded that "wRi-like" Wolbachia spread among different Drosophila in tens of thousands of years. However, our new calibrations suggest these estimates from a mutation-based calibration underestimated wRi-like spread by about a factor of 7. In addition, cif exchanges between wMel-like and wRi-like Wolbachia genomes have occurred over ∼104 to 106 years. Comparing intact cif loci found in various Wolbachia, we find function-preserving selection in their evolution. We discuss these results in light of theoretical predictions concerning selection on cytoplasmic incompatibility phenotypes within and among host lineages. The wMel variants analyzed may offer new options for Wolbachia-based biocontrol efforts.

Indexed as

Evolution, MolecularSymbiont Induced Cytoplasmic IncompatibilityWolbachiaAnimalsDrosophila melanogasterPhylogenySymbiosiscytoplasmic incompatibilityDrosophilaendosymbiosisgenome evolutionhorizontal transmissionhost switchingselfish elements

Identifiers

PMID41986875
PMCPMC13186254

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.