Evidence map›Paper›PMID 41986597›Full record

ArticleCommunications biology2026

Stable bioreactor control reveals acidic pH-driven metabolic reprogramming and mitochondrial dysfunction in human lymphoblastoid cells.

Samhan Alsolami, Yingzi Zhang, Upendra Singh, Yiqing Jin, Nadia Steiner, Kacper Szczepski, Shannon G Klein, Baolei Yuan, Chongwei Bi, Mengge Wang and 6 more

Abstract read
In one paragraph

Article in Communications biology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

Samhan Alsolami *Bioscience Program, Biomedical Sciences Division (BioMed), King Abdullah University of Science and Technology (KAUST), Thuwal, Saudi Arabia.
Yingzi Zhang *Bioscience Program, Biomedical Sciences Division (BioMed), King Abdullah University of Science and Technology (KAUST), Thuwal, Saudi Arabia.
Upendra SinghDepartment of Biochemistry & Molecular Biology (BMB), Sealy Institute for Drug Discovery (SIDD), University of Texas Medical Branch (UTMB), Galveston, TX, USA.
Yiqing JinBioscience Program, Biomedical Sciences Division (BioMed), King Abdullah University of Science and Technology (KAUST), Thuwal, Saudi Arabia.
Nadia SteinerBioscience Program, Biomedical Sciences Division (BioMed), King Abdullah University of Science and Technology (KAUST), Thuwal, Saudi Arabia.ORCID http://orcid.org/0000-0002-2940-2674
Kacper SzczepskiBioscience Program, Biomedical Sciences Division (BioMed), King Abdullah University of Science and Technology (KAUST), Thuwal, Saudi Arabia.
Shannon G KleinMarine Science Program, Biological and Environmental Science and Engineering Division (BESE), King Abdullah University of Science and Technology (KAUST), Thuwal, Saudi Arabia.ORCID http://orcid.org/0000-0001-8190-3188
Baolei YuanBioscience Program, Biomedical Sciences Division (BioMed), King Abdullah University of Science and Technology (KAUST), Thuwal, Saudi Arabia.ORCID http://orcid.org/0000-0003-4159-3319
Chongwei BiBioscience Program, Biomedical Sciences Division (BioMed), King Abdullah University of Science and Technology (KAUST), Thuwal, Saudi Arabia.
Mengge WangBioscience Program, Biomedical Sciences Division (BioMed), King Abdullah University of Science and Technology (KAUST), Thuwal, Saudi Arabia.
Siyi FuBioscience Program, Biomedical Sciences Division (BioMed), King Abdullah University of Science and Technology (KAUST), Thuwal, Saudi Arabia.
Juan Carlos Izpisua BelmonteKAUST Center of Excellence for Smart Health (KCSH), Thuwal, Saudi Arabia.ORCID http://orcid.org/0000-0003-0557-8875
Pierre J MagistrettiBioscience Program, Biomedical Sciences Division (BioMed), King Abdullah University of Science and Technology (KAUST), Thuwal, Saudi Arabia.
Carlos M DuarteMarine Science Program, Biological and Environmental Science and Engineering Division (BESE), King Abdullah University of Science and Technology (KAUST), Thuwal, Saudi Arabia.ORCID http://orcid.org/0000-0002-1213-1361
Lukasz JaremkoDepartment of Biochemistry & Molecular Biology (BMB), Sealy Institute for Drug Discovery (SIDD), University of Texas Medical Branch (UTMB), Galveston, TX, USA.ORCID http://orcid.org/0000-0001-7684-9359
Mo LiBioscience Program, Biomedical Sciences Division (BioMed), King Abdullah University of Science and Technology (KAUST), Thuwal, Saudi Arabia. Mo.li@kaust.edu.sa.ORCID http://orcid.org/0000-0003-0827-8907

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Human cells require pH regulation to maintain physiological function, yet the molecular consequences of acidic environments remain incompletely understood. Here, we employ a gas-only bioreactor to control pH, oxygen, and temperature. Integrated multi-omics analyses reveal that acidic pH induces a glycolytic metabolic shift, suppresses proliferation, and promotes accumulation of lactate and oncometabolites alongside mitochondrial dysfunction. Acidic conditions increase reactive oxygen species (ROS) and activate inflammatory and immune pathways, leading to heteroplasmic enrichment of a pathogenic mitochondrial mutation. Acidic pH depletes intracellular NAD⁺, partly driven by PARP1 activation. Restoring NAD⁺ through nicotinamide mononucleotide (NMN) supplementation partially rescues proliferation and stress-associated transcription, while elevating NAD

Indexed as

BioreactorsLymphocytesMetabolic ReprogrammingMitochondriaCell ProliferationDNA, MitochondrialHumansHydrogen-Ion ConcentrationNADReactive Oxygen SpeciesDNA, MitochondrialNADReactive Oxygen Species

Identifiers

PMID41986597
PMCPMC13324789

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.