Evidence map›Paper›PMID 41984916›Full record

ArticlePloS one2026

Stage-specific screening reveals differential resilience response to cold stress in rice.

Fahamida Akter, Partha S Biswas, Abul Kalam Mohammad Aminul Islam, Mohammad Sharif Raihan, Md Mizanur Rahman, Khandakar Md Iftekharuddaula, Mohammad Rafiqul Islam, John Damien Platten

Abstract read
In one paragraph

Article in PloS one, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Fahamida AkterDepartment of Genetics and Plant Breeding, Gazipur Agricultural University, Gazipur, Bangladesh.ORCID https://orcid.org/0009-0004-1055-6886
Partha S BiswasPlant Breeding Division, Bangladesh Rice Research Institute, Gazipur, Bangladesh.ORCID https://orcid.org/0000-0001-9519-428X
Abul Kalam Mohammad Aminul IslamDepartment of Genetics and Plant Breeding, Gazipur Agricultural University, Gazipur, Bangladesh.
Mohammad Sharif RaihanDepartment of Genetics and Plant Breeding, Gazipur Agricultural University, Gazipur, Bangladesh.
Md Mizanur RahmanDepartment of Soil Science, Gazipur Agricultural University, Gazipur, Bangladesh.ORCID https://orcid.org/0000-0002-2353-6823
Khandakar Md IftekharuddaulaPlant Breeding Division, Bangladesh Rice Research Institute, Gazipur, Bangladesh.
Mohammad Rafiqul IslamInternational Rice Research Institute, Los Banos, Philippines.
John Damien PlattenIRRI Bangladesh Office, Dhaka, Bangladesh.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Rice cultivation in the northern and northeastern districts of Bangladesh faces cold stress during the seedling and reproductive stages that drastically reduces yield. As a precursor to generate improved elite lines, a diverse panel of rice germplasm was screened to identify genotypes with resilience to low temperature at both key developmental phases. Seedling-stage tolerance was assessed using an artificial cold-water tank, while reproductive-stage cold tolerance was evaluated under both natural field conditions and controlled cold screening facilities. Two breeding lines - BR8907-B-1-2-CS1-4-CS2-P3-4 and BR8909-B-12-2-CS1-4-CS2-P2-3-2, demonstrating minimal leaf discoloration and the highest survival rates, and lacking the known QTL (qSCT1) for seedling stage cold tolerance indicated contributions from other QTLs or genetic factors. Five genotypes (Bhutan, IR83222-F11-173, Rata Boro, BRRI dhan74, BR11712-4R-227) showed tolerance at the reproductive stage, while three lines (Bhutan, BR11712-4R-227, and BR12266-44-11-32-5-1-1-HR10-B) showed moderate tolerance at both seedling and reproductive stages, indicating stage-specific responses. The genotypes BR10317-5R-25, IR18A1859, and BRRI dhan28 were consistently susceptible at both stages. Principal Component Analysis (PCA) indicated that seedling and reproductive traits contributed jointly to variation under field conditions but independent under controlled environments, reflecting stage-specific genetic regulation. These findings highlight the complex, stage-dependent nature of cold tolerance and the importance of stage-specific screening to inform effective breeding strategies for enhanced cold resilience in rice.

Indexed as

Cold-Shock ResponseOryzaCold TemperatureGenotypePlant BreedingQuantitative Trait LociSeedlings

Identifiers

PMID41984916
PMCPMC13082720

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.