Evidence map›Paper›PMID 41978539›Full record

ArticlePlant physiology2026

Diel-driven variations of leaf dark respiration and metabolite levels in C3 and C4 grasses.

Yuzhen Fan, Guillaume Tcherkez, Andrew P Scafaro, Nicolas L Taylor, Robert T Furbank, Susanne von Caemmerer, Owen K Atkin

Abstract read
In one paragraph

Article in Plant physiology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Decoding plant metabolism.Plant physiology · 2026
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Yuzhen FanARC Centre of Excellence in Plant Energy Biology, Research School of Biology, The Australian National University, Canberra, ACT, Australia.ORCID 0000-0003-1857-9244
Guillaume TcherkezDivision of Plant Sciences, Research School of Biology, The Australian National University, Canberra, ACT, Australia.ORCID 0000-0002-3339-956X
Andrew P ScafaroARC Centre of Excellence in Plant Energy Biology, Research School of Biology, The Australian National University, Canberra, ACT, Australia.ORCID 0000-0003-3738-1145
Nicolas L TaylorSchool of Molecular Sciences, Australian Plant Phenomics Network, ARC Training Centre in Predictive Breeding for Agricultural Futures and The UWA Institute of Agriculture, The University of Western Australia, 35 Stirling Highway, Crawley, Perth, WA 6009, Australia.ORCID 0000-0003-2004-5217
Robert T FurbankDivision of Plant Sciences, Research School of Biology, The Australian National University, Canberra, ACT, Australia.ORCID 0000-0001-8700-6613
Susanne von CaemmererDivision of Plant Sciences, Research School of Biology, The Australian National University, Canberra, ACT, Australia.ORCID 0000-0002-8366-2071
Owen K AtkinARC Centre of Excellence in Plant Energy Biology, Research School of Biology, The Australian National University, Canberra, ACT, Australia.ORCID 0000-0003-1041-5202

Funding

ANU 737/2018ANU DP230103122Australian Research Council CE1401000015Australian Research Council CE140100008Australian Research Council DP230103122INRAE
6 · The paper itself

Abstract

Leaf dark respiration (Rdark) is often measured in artificially dark-adapted samples at a single time point during the day, with temperature-normalized rates often assumed to be constant throughout a 24-h cycle. However, the extent to which the 24-h cycle influences leaf Rdark and respiratory metabolic profile remains unclear, particularly in C4 plants. We quantified O2-based leaf Rdark and metabolites at 6 time points over a diel (ie 24-h) cycle in leaves of 4 grass species (1 C3 and 3 C4 species). We found that Rdark and leaf metabolites varied among species and between dark-adapted day-sampled and night-sampled leaves. In general, C4 plants contained a relatively higher content of organic acids and soluble sugars than C3 plants. Across the 4 species, variations in Rdark were associated with changes in the abundance of metabolites involved in the mitochondrial tricarboxylic acid pathway (malate, fumarate, succinate, and citrate), amino acid metabolism (alanine and asparagine), and sugar interconversion (lactose and mannose). Multivariate statistics suggested that Rdark of the examined species is influenced more by the relative contribution of multiple concurrent metabolic pathways across the diel cycle than by C3 and C4 photosynthetic types. We suggest that Rdark and metabolite profiles measured during daytime on dark-adapted leaves are not good surrogates for nighttime respiratory properties. Understanding how the supply of respiratory substrates varies during the diel cycle would lead to a more accurate prediction of Rdark over the course of a day.

Indexed as

CarbonMetabolomePlant LeavesPoaceaeAmino AcidsCell RespirationCircadian RhythmDarknessPhotosynthesisAmino AcidsCarbon

Identifiers

PMID41978539
PMCPMC13316934

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.