Evidence map›Paper›PMID 41971551›Full record

ArticleFrontiers in plant science2026

Integration of ATAC-seq and RNA-seq unveils transcription factors involved in low-nitrogen tolerance in cucumber.

Bowen Li, Linhao Ma, Huaxiang Wu, Yike Han, Nan Liu, Ce Liu, Shengli Du, Aimin Wei

Abstract read
In one paragraph

Article in Frontiers in plant science, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Bowen LiCollege of Life Science, Nankai University, Tianjin, China.
Linhao MaCollege of Life Science, Nankai University, Tianjin, China.
Huaxiang WuCollege of Life Science, Nankai University, Tianjin, China.
Yike HanCucumber Research Institute, Tianjin Academy of Agricultural Sciences, Tianjin, China.
Nan LiuCucumber Research Institute, Tianjin Academy of Agricultural Sciences, Tianjin, China.
Ce LiuCucumber Research Institute, Tianjin Academy of Agricultural Sciences, Tianjin, China.
Shengli DuCollege of Life Science, Nankai University, Tianjin, China.
Aimin WeiCucumber Research Institute, Tianjin Academy of Agricultural Sciences, Tianjin, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Introduction: Nitrogen (N) availability is one of the major factors limiting cucumber ( Methods: This study investigated the dynamic molecular responses to LN stress and identified key regulatory factors by integrating time-course RNA-seq and ATAC-seq analyses in a tolerant accession (C52) and a sensitive accession (C13). Results: LN treatment induced distinct physiological and transcriptional responses: C52 activated a robust "resource-recycling" system, whereas C13 exhibited global chromatin tightening. We identified the bZIP transcription factor Discussion: These findings provide new insights into the chromatin accessibility-mediated regulation of LN responses and identify

Indexed as

ATAC-seqCsTGA7cucumberlow-nitrogen stressRNA-Seqtranscriptional regulation

Identifiers

PMID41971551
PMCPMC13062244

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.