Evidence map›Paper›PMID 41971443›Full record

ArticleFrontiers in oncology2026

Human endogenous retrovirus profiling reveals heterogenous expression in cutaneous melanoma.

Tongyi Fei, Bhavya Singh, Nicholas Dopkins, Jez L Marston, Jasmine H Francis, Douglas F Nixon, Alexander N Shoushtari, Matthew L Bendall

Abstract read
In one paragraph

Article in Frontiers in oncology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Tongyi FeiDivision of Infectious Diseases, Department of Medicine, Weill Cornell Medicine, New York, NY, United States.
Bhavya SinghDivision of Infectious Diseases, Department of Medicine, Weill Cornell Medicine, New York, NY, United States.
Nicholas DopkinsDivision of Infectious Diseases, Department of Medicine, Weill Cornell Medicine, New York, NY, United States.
Jez L MarstonDivision of Infectious Diseases, Department of Medicine, Weill Cornell Medicine, New York, NY, United States.
Jasmine H FrancisOphthalmic Oncology Service, Memorial Sloan Kettering Cancer Center, New York, NY, United States.
Douglas F NixonDivision of Infectious Diseases, Department of Medicine, Weill Cornell Medicine, New York, NY, United States.
Alexander N ShoushtariOphthalmic Oncology Service, Memorial Sloan Kettering Cancer Center, New York, NY, United States.
Matthew L BendallDivision of Infectious Diseases, Department of Medicine, Weill Cornell Medicine, New York, NY, United States.

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI SELWYN M VICKERS · 1985 to 2026
$347.4M
NCI NIH HHS P30 CA008748
6 · The paper itself

Abstract

Background: Cutaneous melanoma (CM) is a cancer of the pigment-producing melanocytes of the skin. Advances in treatment with immune checkpoint inhibitors (ICI) have greatly improved the outcomes, although not all patients with CM respond to ICI. Emerging evidence shows that ICI responsiveness is correlated with the expression of certain human endogenous retroviruses (HERVs). We aimed to investigate the relationships between HERV expression and outcomes in patients with CM. Methods: We characterized HERV expression from 330 patients with primary or metastatic CM using Telescope, a computational software package that calculates the expression of HERV loci from bulk RNA sequencing datasets. Results: We found that HERVs expression differed between primary and metastatic CM. Using HERV expression alone, three subtypes of metastatic CM had distinct survival outcomes. Among the differentially expressed HERV loci in metastatic and treatment non-responders, we identified HERV-FRD which has the potential to produce the endogenous retrovirus group V Env polyprotein (syncytin-2) precursor. Conclusion: Our analyses demonstrate the unique features of HERV expression in CM metastases and in ICI responsiveness. These exploratory findings identify modulated HERVs in CM, and further studies should be developed to determine whether HERV expression has any predictive or clinical utility.

Indexed as

cutaneous melanoma (CM)human endogenous retrovirus (HERV)immunotherapy responsivenessmetastasissyncytin-2

Identifiers

PMID41971443
PMCPMC13061668

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.